RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 CDC25BP30305 580 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 SLC5A2P31639 672 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 CHRNA4P43681 627 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 PPM1FP49593 454 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 CLCNKAP51800 687 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 GEMP55040 296 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 EIF3EP60228 445 aaKnown RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 HHEXQ03014 270 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 TRA2AQ13595 282 aaKnown RBP eCLIP17.66■□□□□ 0.425e-10■□□□□ 8.1
SRSF1-209ENST00000585096 PRPSAP1Q14558 356 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 KIR2DS5Q14953 304 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 ZNF648Q5T619 568 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 NKAIN2Q5VXU1 208 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 SLC9B2Q86UD5 537 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 SYCE1Q8N0S2 351 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 LRRC57Q8N9N7 239 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 AVL9Q8NBF6 648 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 OR4D9Q8NGE8 314 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 OR10G6Q8NH81 332 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 DTX3LQ8TDB6 740 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 BLOC1S5Q8TDH9 187 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 AHCYL2Q96HN2 611 aaKnown RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 ZMYND15Q9H091 742 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 GBA3Q9H227 469 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 SARS2Q9NP81 518 aaKnown RBP17.66■□□□□ 0.42
SRSF1-209ENST00000585096 AMFRQ9UKV5 643 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 ADGRG1Q9Y653 693 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 CACNA1GO43497 2377 aa17.66■□□□□ 0.42
SRSF1-209ENST00000585096 COL27A1Q8IZC6 1860 aaPredicted RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 IGHV5-10-1A0A0J9YXX1 117 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 TEX51A0A1B0GUA7 166 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 EIF4E1BA6NMX2 242 aaKnown RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 CHUKO15111 745 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 KMOO15229 486 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 CDK14O94921 469 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 RBP3P10745 1247 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 F3P13726 295 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 SPAM1P38567 509 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 LIMK2P53671 638 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 TMEM164Q5U3C3 297 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 ZNF574Q6ZN55 896 aaPredicted RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 PEX26Q7Z412 305 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 GLT6D1Q7Z4J2 308 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 LRRTM4Q86VH4 590 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 TTC30BQ8N4P2 665 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 GDAP1Q8TB36 358 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 C10orf88Q9H8K7 445 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 KLC4Q9NSK0 619 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 IL17CQ9P0M4 197 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 ACSL6Q9UKU0 697 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 AAR2Q9Y312 384 aaKnown RBP17.65■□□□□ 0.42
SRSF1-209ENST00000585096 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
SRSF1-209ENST00000585096 A6NCN8 305 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 GOLGA6L9A6NEM1 432 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 MIF4GDA9UHW6 222 aaKnown RBP17.64■□□□□ 0.41
SRSF1-209ENST00000585096 AGRPO00253 132 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 KCNN4O15554 427 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 DUX1O43812 170 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 PPFIA2O75334 1257 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 PYGMP11217 842 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 HOXB3P14651 431 aaPredicted RBP17.64■□□□□ 0.41
SRSF1-209ENST00000585096 ITIH1P19827 911 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 MAPK10P53779 464 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 CLN3Q13286 438 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 NFATC2Q13469 925 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 GTF2H3Q13889 308 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 C16orf72Q14CZ0 275 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 INSCQ1MX18 579 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 ATP13A5Q4VNC0 1218 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 TMEM71Q6P5X7 295 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 CRTC3Q6UUV7 619 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 TMEM139Q8IV31 216 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 ALG3Q92685 438 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 CCDC74BQ96LY2 380 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 TTC25Q96NG3 672 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 PPP1R2P1Q96PQ5 205 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 TIMM29Q9BSF4 260 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 B3GNT4Q9C0J1 378 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 OSGEPL1Q9H4B0 414 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 CPNE5Q9HCH3 593 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 IL26Q9NPH9 171 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
SRSF1-209ENST00000585096 GLYATL1P3A0A0U1RQE8 302 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 MTX2O75431 263 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 AGTP01019 485 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 ZNF7P17097 686 aaPredicted RBP17.63■□□□□ 0.41
SRSF1-209ENST00000585096 VCLP18206 1134 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 CSTF2P33240 577 aaKnown RBP eCLIP17.63■□□□□ 0.41
SRSF1-209ENST00000585096 EPHA4P54764 986 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 VAC14Q08AM6 782 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 ANKRD20A2Q5SQ80 823 aa17.63■□□□□ 0.41
SRSF1-209ENST00000585096 ANKRD20A1Q5TYW2 823 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms