RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 RPS6KL1Q9Y6S9 549 aa5.29□□□□□ -1.56
VAPA-207ENST00000583879 GOLGA6CA6NDK9 693 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 GOLGA6BA6NDN3 693 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 NPIPB15A6NHN6 443 aaPredicted RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 EIF3CLB5ME19 914 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 DFFAO00273 331 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 EEF2KO00418 725 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 INPP4BO15327 924 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 DAPK3O43293 454 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SOCS5O75159 536 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 EML2O95834 649 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SOD1P00441 154 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 CPP00450 1065 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 GOLGA6DP0CG33 693 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ZNF16P17020 682 aaPredicted RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 ERCC2P18074 760 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 GNLYP22749 145 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 LHCGRP22888 699 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 NFKBIAP25963 317 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 NOS3P29474 1203 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SOX5P35711 763 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 DLSTP36957 453 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 STAT5AP42229 794 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 UQCRFS1P47985 274 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 POLR2FP61218 127 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 HHEXQ03014 270 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 PTPRRQ15256 657 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 OCLNQ16625 522 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 CLEC16AQ2KHT3 1053 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 HSP90AA4PQ58FG1 418 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ERMARDQ5T6L9 678 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 RAET1GQ6H3X3 334 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 CAPRIN2Q6IMN6 1127 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 DOK6Q6PKX4 331 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 C6orf15Q6UXA7 325 aaPredicted RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 ADAMTSL4Q6UY14 1074 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ARHGAP36Q6ZRI8 547 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SLC9B2Q86UD5 537 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 PLXDC1Q8IUK5 500 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ARHGAP12Q8IWW6 846 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 PGBD5Q8N414 524 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 GALNT11Q8NCW6 608 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 EXD1Q8NHP7 514 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SSC4DQ8WTU2 575 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 PDCD6IPQ8WUM4 868 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 PIH1D2Q8WWB5 315 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 AP2M1Q96CW1 435 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ZNF599Q96NL3 588 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 NUDCD1Q96RS6 583 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 EIF3CQ99613 913 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 CNPY3Q9BT09 278 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 ABCG8Q9H221 673 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 VPS16Q9H269 839 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SP110Q9HB58 689 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 NOD2Q9HC29 1040 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 GPATCH2LQ9NWQ4 482 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 GOLGA6AQ9NYA3 693 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 ZNHIT2Q9UHR6 403 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 CD84Q9UIB8 345 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 KCND3Q9UK17 655 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 TLK1Q9UKI8 766 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 PPIL1Q9Y3C6 166 aa5.28□□□□□ -1.56
VAPA-207ENST00000583879 MRPS18BQ9Y676 258 aaKnown RBP5.28□□□□□ -1.56
VAPA-207ENST00000583879 AHCTF1Q8WYP5 2266 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 hCG_2014768A0A024R1R8 64 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 A0A0U1RQS6 177 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PIPSLA2A3N6 862 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 OR5K4A6NMS3 321 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 DNAJC6O75061 913 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 SEMA7AO75326 666 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 KATNA1O75449 491 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 CREG1O75629 220 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 RFPL1O75677 317 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PGLSO95336 258 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 MAP3K6O95382 1288 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PEX11BO96011 259 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PDGFAP04085 211 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PYGLP06737 847 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 ANKRD34CP0C6C1 535 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 ZNF28P17035 718 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 DESP17661 470 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 CTPS1P17812 591 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 SSTR4P31391 388 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 HSPA9P38646 679 aaKnown RBP5.27□□□□□ -1.57
VAPA-207ENST00000583879 HCAR3P49019 387 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 IDH3AP50213 366 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 JAM2P57087 298 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 OGDHQ02218 1023 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 FOXM1Q08050 763 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 TRAF2Q12933 501 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 NFATC2Q13469 925 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 SEMA5AQ13591 1074 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 IL11RAQ14626 422 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 PCSK7Q16549 785 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 CA9Q16790 459 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 TCP11X2Q5H9J9 407 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 RALGPS1Q5JS13 557 aa5.27□□□□□ -1.57
VAPA-207ENST00000583879 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms