RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ACOX2Q99424 681 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 SCPEP1Q9HB40 452 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PREBQ9HCU5 417 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 SLC52A3Q9NQ40 469 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 C2orf42Q9NWW7 574 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 C9orf78Q9NZ63 289 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 ABI3Q9P2A4 366 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 KLHL20Q9Y2M5 609 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PTPRCP08575 1304 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 PCNX3Q9H6A9 2034 aa3.14□□□□□ -1.91
SMCHD1-206ENST00000581631 C1orf226A1L170 272 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 NPIPB15A6NHN6 443 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 HHLA1C9JL84 531 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF821O75541 412 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 POLR2CP19387 275 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 F2RL1P55085 397 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 CASP6P55212 293 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 OLR1P78380 273 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 TMEM115Q12893 351 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 OLIG2Q13516 323 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 DCTN2Q13561 401 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 FRG1Q14331 258 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF234Q14588 700 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 DCST1Q5T197 706 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 ATF7IPQ6VMQ6 1270 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 CACNA2D4Q7Z3S7 1137 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 R3HCC1LQ7Z5L2 792 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 GPR180Q86V85 440 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 NRROSQ86YC3 692 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 TSPYL6Q8N831 410 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 KCNG4Q8TDN1 519 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF473Q8WTR7 871 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 SMARCE1Q969G3 411 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 TAAR8Q969N4 342 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 MMABQ96EY8 250 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 RRNAD1Q96FB5 475 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF354BQ96LW1 612 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 POLR3CQ9BUI4 534 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 UBXN6Q9BZV1 441 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 WDR13Q9H1Z4 485 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 PDZD7Q9H5P4 517 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 RPS10P5Q9NQ39 176 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 OGFRQ9NZT2 677 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 CNOT8Q9UFF9 292 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 GTF2A1LQ9UNN4 478 aa3.13□□□□□ -1.91
SMCHD1-206ENST00000581631 A0A1B0GVC2 190 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 A0A1W2PPH5 198 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNHIT1O43257 154 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 PAGE4O60829 102 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 SEC14L2O76054 403 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 SPARCP09486 303 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 HOXC8P31273 242 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 PBX3P40426 434 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 RGS2P41220 211 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 FASLGP48023 281 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 AMPHP49418 695 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 CLDN20P56880 219 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 COG7P83436 770 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 CEBPZQ03701 1054 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 GRIK2Q13002 908 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 DPCR1Q3MIW9 517 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 CDONQ4KMG0 1287 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 TMEM35AQ53FP2 167 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 OR7E24Q6IFN5 339 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 TTI2Q6NXR4 508 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM171BQ6P995 826 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM222BQ8WU58 562 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 SLC44A1Q8WWI5 657 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 FCAMRQ8WWV6 532 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 INTS12Q96CB8 462 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF653Q96CK0 615 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF414Q96IQ9 312 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 ART5Q96L15 291 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 TBATAQ96M53 351 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 HARBI1Q96MB7 349 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 TMEM68Q96MH6 324 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 SEC62Q99442 399 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 RANBP17Q9H2T7 1088 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 TFB2MQ9H5Q4 396 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 JMJD4Q9H9V9 463 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 DLGAP2Q9P1A6 1054 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 FBXL2Q9UKC9 423 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 MAU2Q9Y6X3 613 aa3.12□□□□□ -1.91
SMCHD1-206ENST00000581631 M0QZ24 198 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 HS3ST1O14792 307 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 KCNK5O95279 499 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM106CPP0CH98 169 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 HOXC9P31274 260 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 APOBEC1P41238 236 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 RPL7AP62424 266 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 CDC16Q13042 620 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 CCNG2Q16589 344 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 DECR1Q16698 335 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 GORABQ5T7V8 394 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms