RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CDC20Q12834 499 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 SLC10A2Q12908 348 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-214ENST00000580073 MAP7Q14244 749 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 CLCA4Q14CN2 919 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 PDK2Q15119 407 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 LLGL1Q15334 1064 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 TAZQ16635 292 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-214ENST00000580073 ANKS6Q68DC2 871 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 NCBP2-AS2Q69YL0 99 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 AADACL2Q6P093 401 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 PLXDC1Q8IUK5 500 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 ESX1Q8N693 406 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 C9orf43Q8TAL5 461 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-214ENST00000580073 LRRN4Q8WUT4 740 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 ANP32BQ92688 251 aaKnown RBP13.24□□□□□ -0.29
TRAF4-214ENST00000580073 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 NSMCE3Q96MG7 304 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 LYSMD1Q96S90 227 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 FBXO8Q9NRD0 319 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 RAD18Q9NS91 495 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 ZNHIT2Q9UHR6 403 aa13.24□□□□□ -0.29
TRAF4-214ENST00000580073 PTPN13Q12923 2485 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 LRRD1A4D1F6 860 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 LILRA5A6NI73 299 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 INPP4BO15327 924 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 PSTPIP1O43586 416 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 MFSD11O43934 449 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 KRT1P04264 644 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 NTRK1P04629 796 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 ANKRD34CP0C6C1 535 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 F3P13726 295 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CCNCP24863 283 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CTNNA2P26232 953 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CTNNA1P35221 906 aaKnown RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CASRP41180 1078 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CDKN2BP42772 138 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 FAM182AQ5T1J6 154 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CHST15Q7LFX5 561 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 LYSMD3Q7Z3D4 306 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 MAP7D3Q8IWC1 876 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 BMPERQ8N8U9 685 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 LPCAT1Q8NF37 534 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 MAML1Q92585 1016 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 RNF157Q96PX1 679 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 RIOK2Q9BVS4 552 aaKnown RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 ADGRE3Q9BY15 652 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 CARD9Q9H257 536 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 OCIAD1Q9NX40 245 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 PILRAQ9UKJ1 303 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 TMEM98Q9Y2Y6 226 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 TMEM184BQ9Y519 407 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-214ENST00000580073 KCTD3Q9Y597 815 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 PCDHB3Q9Y5E6 796 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
TRAF4-214ENST00000580073 UBR5O95071 2799 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 POLR1CO15160 346 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 MATN3O15232 486 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PDHA1P08559 390 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 ACP5P13686 325 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 MPSTP25325 297 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 MAPK9P45984 424 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PTSQ03393 145 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 GBE1Q04446 702 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 NFATC2Q13469 925 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PAFAH1B3Q15102 231 aaKnown RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 ZNF569Q5MCW4 686 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PDPK2PQ6A1A2 396 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 NPNTQ6UXI9 565 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 SPOCD1Q6ZMY3 1216 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 ARHGAP22Q7Z5H3 698 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PLD5Q8N7P1 536 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PTCD2Q8WV60 388 aaKnown RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 APOBEC4Q8WW27 367 aaKnown RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 NCSTNQ92542 709 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PMEPA1Q969W9 287 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 UCK1Q9HA47 277 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 PCDH9Q9HC56 1237 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 TRMT1Q9NXH9 659 aaKnown RBP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 TMEM9Q9P0T7 183 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 ST14Q9Y5Y6 855 aa13.22□□□□□ -0.29
TRAF4-214ENST00000580073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAF4-214ENST00000580073 TOX3O15405 576 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-214ENST00000580073 KRT86O43790 486 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 DNAJC6O75061 913 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 STK17BO94768 372 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 PYGMP11217 842 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 TCN2P20062 427 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 SPINT3P49223 89 aa13.21□□□□□ -0.29
TRAF4-214ENST00000580073 ARSDP51689 593 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms