RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 FAM45BPQ6NSW5 357 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TIFABQ6ZNK6 161 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 PLA2G15Q8NCC3 412 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FAM45AQ8TCE6 357 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FOXJ1Q92949 421 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 BIRC7Q96CA5 298 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 COX14Q96I36 57 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 AARSD1Q9BTE6 412 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 TEX101Q9BY14 249 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 P2RY12Q9H244 342 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 WDR26Q9H7D7 661 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MED4Q9NPJ6 270 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 PHPT1Q9NRX4 125 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 SENP1Q9P0U3 644 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MBD1Q9UIS9 605 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 GNPTGQ9UJJ9 305 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 CRYL1Q9Y2S2 319 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 TRIM49D1C9J1S8 452 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 RAD51BO15315 384 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 INPP4BO15327 924 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MAP3K13O43283 966 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 VEGFDO43915 354 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 PKMP14618 531 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 CD9P21926 228 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 IGFALSP35858 605 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FNTBP49356 437 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 SERPINB8P50452 374 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 SLC12A2P55011 1212 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 CDK3Q00526 305 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 RPL6Q02878 288 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 CSTF1Q05048 431 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 DMWDQ09019 674 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 INPP5AQ14642 412 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TNFAIP8L3Q5GJ75 292 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MROH9Q5TGP6 573 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TSSK4Q6SA08 328 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MACC1Q6ZN28 852 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 HEATR4Q86WZ0 1026 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MAML2Q8IZL2 1156 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 DCLK2Q8N568 766 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 FAM160A2Q8N612 972 aaPredicted RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 FRMD1Q8N878 549 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 GPATCH11Q8N954 259 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MZB1Q8WU39 189 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 ISL2Q96A47 359 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TSPAN17Q96FV3 270 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 ATXN7L3BQ96GX2 97 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 EPHX3Q9H6B9 360 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TRIM39Q9HCM9 518 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 MTO1Q9Y2Z2 717 aaKnown RBP10.63□□□□□ -0.71
SS18-213ENST00000579640 VWA7Q9Y334 891 aa10.63□□□□□ -0.71
SS18-213ENST00000579640 TRIOO75962 3097 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 A0A1W2PPC4 97 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 HMX2A2RU54 273 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 GPR89AB7ZAQ6 455 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 CACNB4O00305 520 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 OR1I1O60431 355 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 MT-ND3P03897 115 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 F7P08709 466 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 OR56A5P0C7T3 313 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 GPR89BP0CG08 455 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 MYCLP1P12525 358 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 AVPR2P30518 371 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 FMO4P31512 558 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 ABCG1P45844 678 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 NUBP1P53384 320 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 KIAA1024LP59773 190 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 YPEL5P62699 121 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 TMEM115Q12893 351 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 BMPR2Q13873 1038 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 GTF2H3Q13889 308 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 USP10Q14694 798 aaKnown RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 ZNF528Q3MIS6 628 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 HECTD2Q5U5R9 776 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 PTRHD1Q6GMV3 140 aaKnown RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 ZNF549Q6P9A3 640 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 CCDC91Q7Z6B0 441 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 TRABD2AQ86V40 505 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 CYP4X1Q8N118 509 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 PNPLA1Q8N8W4 532 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 TMEM145Q8NBT3 493 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 ACMSDQ8TDX5 336 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 KCNJ9Q92806 393 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 ELMO2Q96JJ3 720 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 ZNF514Q96K75 400 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 CABS1Q96KC9 395 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 BIRC8Q96P09 236 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 PANX3Q96QZ0 392 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 APOOQ9BUR5 198 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 BOCQ9BWV1 1114 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 TSSK1BQ9BXA7 367 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 DUSP15Q9H1R2 295 aaPredicted RBP10.62□□□□□ -0.71
SS18-213ENST00000579640 POPDC3Q9HBV1 291 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 ACTL7BQ9Y614 415 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 CACNA1IQ9P0X4 2223 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms