RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 COPS8Q99627 209 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 RHOXF2Q9BQY4 288 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 CARS2Q9HA77 564 aaKnown RBP15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 ZDHHC3Q9NYG2 299 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 APOBEC3BQ9UH17 382 aaKnown RBP15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 ZNHIT2Q9UHR6 403 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 GPSM3Q9Y4H4 160 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 PCDHGB2Q9Y5G2 931 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 TEX264Q9Y6I9 313 aa15.4■□□□□ 0.06
SLC6A4-205ENST00000579221 GON4LQ3T8J9 2241 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 NEMP2A6NFY4 417 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CFAP99D6REC4 459 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CD3EAPO15446 510 aaKnown RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 GPR39O43194 453 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 NUAK1O60285 661 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PCDHGA12O60330 932 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 DNAJC6O75061 913 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 MTX2O75431 263 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 BANF1O75531 89 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PIAS2O75928 621 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SLU7O95391 586 aaKnown RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 FUCA1P04066 466 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 ZNF8P17098 575 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 DGKAP23743 735 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 ACRV1P26436 265 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 AKT1P31749 480 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 FOXN2P32314 431 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CA5AP35218 305 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 GNPDA1P46926 289 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CDKN1CP49918 316 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 LIMK1P53667 647 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 IL9RQ01113 521 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 LONRF1Q17RB8 773 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 AARS2Q5JTZ9 985 aaKnown RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SPANXN3Q5MJ09 141 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 HP1BP3Q5SSJ5 553 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 STPG1Q5TH74 334 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 MRNIPQ6NTE8 343 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PSAPL1Q6NUJ1 521 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CEP128Q6ZU80 1094 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SDCCAG8Q86SQ7 713 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 GALNT13Q8IUC8 556 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SDR16C5Q8N3Y7 309 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 FSTL5Q8N475 847 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 LMX1AQ8TE12 382 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PYROXD1Q8WU10 500 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PDXPQ96GD0 296 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 TSPYL1Q9H0U9 437 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 SAYSD1Q9NPB0 183 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CATSPERZQ9NTU4 200 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 ZC3H7BQ9UGR2 993 aaKnown RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 PNMA8BQ9ULN7 279 aaPredicted RBP15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 CSNK1G3Q9Y6M4 447 aa15.39■□□□□ 0.05
SLC6A4-205ENST00000579221 ZCWPW2A0A1B0GU75 182 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 CHUKO15111 745 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PFDN6O15212 129 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 KMOO15229 486 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 AQP9O43315 295 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 GRID2O43424 1007 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 EPHA8P29322 1005 aaPredicted RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PMLP29590 882 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ARCN1P48444 511 aaKnown RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 CUL1Q13616 776 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 THOC5Q13769 683 aaKnown RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 HLTFQ14527 1009 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ITIH4Q14624 930 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ELOCQ15369 112 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PYCR3Q53H96 274 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PRRT3Q5FWE3 981 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ANKMY2Q8IV38 441 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 IGDCC3Q8IVU1 814 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PIANPQ8IYJ0 282 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ZBED8Q8IZ13 594 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 RBFAQ8N0V3 343 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 LRRN4CLQ8ND94 238 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 GABPB2Q8TAK5 448 aaPredicted RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 NETO1Q8TDF5 533 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ZNF514Q96K75 400 aaPredicted RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 TRIM56Q9BRZ2 755 aaKnown RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 PHACTR1Q9C0D0 580 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 TCEAL2Q9H3H9 227 aaPredicted RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 C20orf96Q9NUD7 363 aaPredicted RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 ZDHHC18Q9NUE0 388 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 TRNAU1APQ9NX07 287 aaKnown RBP15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 GPR34Q9UPC5 381 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 DOLKQ9UPQ8 538 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 CHMP2BQ9UQN3 213 aa15.38■□□□□ 0.05
SLC6A4-205ENST00000579221 SCAMP1O15126 338 aa15.37■□□□□ 0.05
SLC6A4-205ENST00000579221 SDC3O75056 442 aa15.37■□□□□ 0.05
SLC6A4-205ENST00000579221 PRSS56P0CW18 603 aa15.37■□□□□ 0.05
SLC6A4-205ENST00000579221 ATP1B2P14415 290 aaPredicted RBP15.37■□□□□ 0.05
SLC6A4-205ENST00000579221 ARNTP27540 789 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms