RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CCDC50Q8IVM0 306 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 ZNF843Q8N446 348 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 VAT1Q99536 393 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.69■□□□□ 0.1
CRLF3-203ENST00000578692 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 BPIFA1Q9NP55 256 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 LUC7LQ9NQ29 371 aaKnown RBP15.69■□□□□ 0.1
CRLF3-203ENST00000578692 KLC4Q9NSK0 619 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 KLHL8Q9P2G9 620 aaPredicted RBP15.69■□□□□ 0.1
CRLF3-203ENST00000578692 PDP2Q9P2J9 529 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
CRLF3-203ENST00000578692 SPO11Q9Y5K1 396 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 MGAQ8IWI9 3026 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 DUX1O43812 170 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 EPOP01588 193 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 CYLC1P35663 651 aaPredicted RBP15.68■□□□□ 0.1
CRLF3-203ENST00000578692 HMGCLP35914 325 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 WNT3AP56704 352 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 SRSF6Q13247 344 aaKnown RBP15.68■□□□□ 0.1
CRLF3-203ENST00000578692 LY6DQ14210 128 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 MANEAQ5SRI9 462 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 KDELC1Q6UW63 502 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 ZNF567Q8N184 647 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 CCDC112Q8NEF3 446 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 NCSTNQ92542 709 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 HAUS1Q96CS2 278 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 RBM41Q96IZ5 413 aaKnown RBP15.68■□□□□ 0.1
CRLF3-203ENST00000578692 PLEKHG4BQ96PX9 1271 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 FCRL5Q96RD9 977 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 TRABDQ9H4I3 376 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 PRDM8Q9NQV8 689 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 PCDHGA3Q9Y5H0 932 aa15.68■□□□□ 0.1
CRLF3-203ENST00000578692 A8MU76 341 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 HACD1B0YJ81 288 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.67■□□□□ 0.1
CRLF3-203ENST00000578692 KMOO15229 486 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 VEGFDO43915 354 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 CDK14O94921 469 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 TNNT3P45378 269 aaPredicted RBP15.67■□□□□ 0.1
CRLF3-203ENST00000578692 MARCKSL1P49006 195 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 INSCQ1MX18 579 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 SNAP47Q5SQN1 464 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 C11orf63Q6NUN7 778 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 WDR74Q6RFH5 385 aaPredicted RBP15.67■□□□□ 0.1
CRLF3-203ENST00000578692 DAAM2Q86T65 1068 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 LRRTM4Q86VH4 590 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 SLC25A41Q8N5S1 370 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 AVL9Q8NBF6 648 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 ART4Q93070 314 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 SGF29Q96ES7 293 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 MRGPRX2Q96LB1 330 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 HEMGNQ9BXL5 484 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 OSGEPL1Q9H4B0 414 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 OCIAD1Q9NX40 245 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 SLC39A1Q9NY26 324 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 CPNE7Q9UBL6 633 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 SLC23A2Q9UGH3 650 aa15.67■□□□□ 0.1
CRLF3-203ENST00000578692 EPN1Q9Y6I3 576 aaPredicted RBP15.67■□□□□ 0.1
CRLF3-203ENST00000578692 EFCAB7A8K855 629 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 STMND1H3BQB6 276 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 MTX2O75431 263 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 ZNF7P17097 686 aaPredicted RBP15.66■□□□□ 0.1
CRLF3-203ENST00000578692 XRCC1P18887 633 aaPredicted RBP15.66■□□□□ 0.1
CRLF3-203ENST00000578692 ARSDP51689 593 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 EPHA4P54764 986 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 TMEM115Q12893 351 aaPredicted RBP15.66■□□□□ 0.1
CRLF3-203ENST00000578692 NOMO1Q15155 1222 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 SIRPB2Q5JXA9 342 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 CRTC3Q6UUV7 619 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 ARHGAP22Q7Z5H3 698 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 ZNF605Q86T29 641 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 VASH2Q86V25 355 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 KRT35Q92764 455 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 VPS35Q96QK1 796 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 ASPSCR1Q9BZE9 553 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 TRHDEQ9UKU6 1024 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 TMPRSS11EQ9UL52 423 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 B3GALT1Q9Y5Z6 326 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 BAHCC1Q9P281 2608 aa15.66■□□□□ 0.1
CRLF3-203ENST00000578692 B4E171 279 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 F5H423 210 aaPredicted RBP15.65■□□□□ 0.1
CRLF3-203ENST00000578692 TSPAN7P41732 249 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 CHRNA4P43681 627 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 MAPK9P45984 424 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 COPS2P61201 443 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 MPP3Q13368 585 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 XRCC4Q13426 336 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 SLC1A5Q15758 541 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 PPP2R5EQ16537 467 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 PLA2G4EQ3MJ16 856 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 ATP13A5Q4VNC0 1218 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 DCAF12Q5T6F0 453 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 BBS12Q6ZW61 710 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 FAM129CQ86XR2 697 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 TTC30BQ8N4P2 665 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 ZSCAN1Q8NBB4 408 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 GDAP1Q8TB36 358 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 BRSK1Q8TDC3 778 aa15.65■□□□□ 0.1
CRLF3-203ENST00000578692 JPH3Q8WXH2 748 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms