RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MTCL1Q9Y4B5 1905 aaKnown RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 TSPAN11A1L157 253 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 AP2A2O94973 939 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 PCSK2P16519 638 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 SP100P23497 879 aaPredicted RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 MAPK9P45984 424 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 NRIP1P48552 1158 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 ATP4BP51164 291 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 INHBCP55103 352 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 PKNOX1P55347 436 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 DCDC1P59894 354 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 KLF10Q13118 480 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 STX5Q13190 355 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 CYLC2Q14093 348 aaPredicted RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 CHRNA6Q15825 494 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 CDKN3Q16667 212 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 ZNF284Q2VY69 593 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 HSF5Q4G112 596 aaPredicted RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 SLC9B1Q4ZJI4 515 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 UNC50Q53HI1 259 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 CDKL4Q5MAI5 379 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 CTSL3PQ5NE16 218 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 DSG4Q86SJ6 1040 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 SCUBE1Q8IWY4 988 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 NRSN1Q8IZ57 195 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 NXPE1Q8N323 547 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 CD200R1Q8TD46 325 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 ING5Q8WYH8 240 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 STMN2Q93045 179 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 EXT2Q93063 718 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 PPP1R16AQ96I34 528 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 MAELQ96JY0 434 aaKnown RBP11.02□□□□□ -0.65
SKA2-204ENST00000578519 C1QTNF3Q9BXJ4 246 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 GSTO2Q9H4Y5 243 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 MEAF6Q9HAF1 191 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 TRPV4Q9HBA0 871 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 ELOVL2Q9NXB9 296 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 SUN2Q9UH99 717 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 SLCO3A1Q9UIG8 710 aa11.02□□□□□ -0.65
SKA2-204ENST00000578519 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 UPK3BL1B0FP48 263 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 UPK3BL2E5RIL1 263 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 E9PBE3 544 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 UBXN8O00124 270 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 PSMD11O00231 422 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 AZIN1O14977 448 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 UBDO15205 165 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 DCXO43602 365 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 KLK8O60259 260 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 KLHL41O60662 606 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 NIPSNAP2O75323 286 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ECI2O75521 394 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 SLC25A14O95258 325 aaPredicted RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 TRIM16O95361 564 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 CYP17A1P05093 508 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 CISD3P0C7P0 127 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 COX4I1P13073 169 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 HNRNPLP14866 589 aaKnown RBP eCLIP11.01□□□□□ -0.65
SKA2-204ENST00000578519 MYOGP15173 224 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 PIK3CGP48736 1102 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 SPINT3P49223 89 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 CDKN1CP49918 316 aaPredicted RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 CCR3P51677 355 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 CLCN7P51798 805 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 RAP1GDS1P52306 607 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 TIAL1Q01085 375 aaKnown RBP eCLIP11.01□□□□□ -0.65
SKA2-204ENST00000578519 CLCQ05315 142 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ELP6Q0PNE2 266 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 LCP2Q13094 533 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 SQLEQ14534 574 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 NAA25Q14CX7 972 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 PDCD2Q16342 344 aaPredicted RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 TRMT5Q32P41 509 aaKnown RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 EML3Q32P44 896 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 LRRC66Q68CR7 880 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 TMC5Q6UXY8 1006 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 RINLQ6ZS11 566 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 Q6ZVU0 165 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 MAVSQ7Z434 540 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 NET1Q7Z628 596 aaPredicted RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 TCAIMQ8N3R3 496 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ZBTB2Q8N680 514 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 NAT16Q8N8M0 369 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 SIDT2Q8NBJ9 832 aaKnown RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 TMIEQ8NEW7 156 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 OR2A12Q8NGT7 310 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ITFG1Q8TB96 612 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 AGR3Q8TD06 166 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 EEF1AKMT1Q8WVE0 214 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 OR8D1Q8WZ84 308 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 PTERQ96BW5 349 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ZSWIM3Q96MP5 696 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 CADM1Q9BY67 442 aaKnown RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 UNKQ9C0B0 810 aaKnown RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 FAM83DQ9H4H8 585 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms