RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 LRRC6Q86X45 466 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 TDRPQ86YL5 185 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 SLITRK4Q8IW52 837 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 OR13C4Q8NGS5 318 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 OR4L1Q8NH43 312 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 UBLCP1Q8WVY7 318 aaPredicted RBP7.96□□□□□ -1.13
COPS3-215ENST00000578317 HMGB4Q8WW32 186 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 CDKL2Q92772 493 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 CFAP36Q96G28 342 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 TRIM55Q9BYV6 548 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 BTBD1Q9H0C5 482 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 SLC6A17Q9H1V8 727 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 FAM83DQ9H4H8 585 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 C20orf96Q9NUD7 363 aaPredicted RBP7.96□□□□□ -1.13
COPS3-215ENST00000578317 NSMCE4AQ9NXX6 385 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 SLC24A2Q9UI40 661 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 BPTFQ12830 3046 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 SHROOM3Q8TF72 1996 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 TRBV5-4A0A0C4DH59 114 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 A0A0U1RQS6 177 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 CCDC162PA2VCL2 907 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 LRRC72A6NJI9 287 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 A8MX80 341 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 PLK4O00444 970 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 GAPDHSO14556 408 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 BUD23O43709 281 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 TM7SF2O76062 418 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 SRP72O76094 671 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 RECQL5O94762 991 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 PDGFBP01127 241 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 C1SP09871 688 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 C6P13671 934 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 GM2AP17900 193 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 NUDT1P36639 197 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 SPAM1P38567 509 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 THOC5Q13769 683 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 PTPRCAPQ14761 206 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 KBTBD12Q3ZCT8 623 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 UBAP2Q5T6F2 1119 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 HENMT1Q5T8I9 393 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 ANO7Q6IWH7 933 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 MRNIPQ6NTE8 343 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 AFTPHQ6ULP2 937 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 KIAA1324Q6UXG2 1013 aaKnown RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 CERS6Q6ZMG9 384 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 SDCCAG8Q86SQ7 713 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 SLC26A11Q86WA9 606 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 TRIM69Q86WT6 500 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 HORMAD1Q86X24 394 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 GPR26Q8NDV2 337 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 OR2T34Q8NGX1 318 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 OR6P1Q8NGX9 317 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 OR14C36Q8NHC7 312 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 ZNF398Q8TD17 642 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 CXorf40AQ8TE69 158 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 GANCQ8TET4 914 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 DTD2Q96FN9 168 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 LENG8Q96PV6 779 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 DHRS4Q9BTZ2 278 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 MIR1-1HGQ9H1L0 117 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 PCED1AQ9H1Q7 454 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 BPIFA1Q9NP55 256 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 WSB2Q9NYS7 404 aaPredicted RBP7.96□□□□□ -1.14
COPS3-215ENST00000578317 SIRPGQ9P1W8 387 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 ITM2BQ9Y287 266 aa7.96□□□□□ -1.14
COPS3-215ENST00000578317 GLYATL1P3A0A0U1RQE8 302 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 IGLON5A6NGN9 336 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 CD3EAPO15446 510 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 LATO43561 262 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 PCDH8O95206 1070 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 GOT2P00505 430 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 SHBGP04278 402 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 PYGLP06737 847 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ERVK-10P10266 1014 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 OGNP20774 298 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 TEAD1P28347 426 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 CD6P30203 668 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 FOXN2P32314 431 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ACSL1P33121 698 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 GMPRP36959 345 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 PPARGP37231 505 aaPredicted RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 ETV3P41162 512 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 LEPRP48357 1165 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 CCR5P51681 352 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ADARP55265 1226 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 SEMG2Q02383 582 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 CACNG1Q06432 222 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 NFATC2Q13469 925 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 TYSND1Q2T9J0 566 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ZNF284Q2VY69 593 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 LRRC73Q5JTD7 316 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 AARS2Q5JTZ9 985 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 LYPLAL1Q5VWZ2 237 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 MARK2Q7KZI7 788 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 SNX20Q7Z614 316 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 KCNMB4Q86W47 210 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 CILP2Q8IUL8 1156 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 UNC5BQ8IZJ1 945 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 TRAM1L1Q8N609 369 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 C2CD4AQ8NCU7 369 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms