RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TCF12Q99081 682 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 FAM167BQ9BTA0 163 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
MKS1-206ENST00000577824 RMI1Q9H9A7 625 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 MARCH4Q9P2E8 410 aaPredicted RBP12.57□□□□□ -0.4
MKS1-206ENST00000577824 CRLS1Q9UJA2 301 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
MKS1-206ENST00000577824 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
MKS1-206ENST00000577824 LNP1A1A4G5 178 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 PRSS38A1L453 326 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 CD3EAPO15446 510 aaKnown RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 YKT6O15498 198 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 NUAK1O60285 661 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 DFNA5O60443 496 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 CFIP05156 583 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 TUBBP07437 444 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 SYPP08247 313 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 PRSS56P0CW18 603 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 TTPAP49638 278 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 CDKN1CP49918 316 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 GPX6P59796 221 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 VSNL1P62760 191 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 ALG11Q2TAA5 492 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 BCL7AQ4VC05 210 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 RNF187Q5TA31 235 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 MRNIPQ6NTE8 343 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 KIAA0408Q6ZU52 694 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 TRIM74Q86UV6 250 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 CCDC25Q86WR0 208 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 CALML6Q8TD86 181 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 OR1E3Q8WZA6 343 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 COPS8Q99627 209 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 CDC42EP4Q9H3Q1 356 aaKnown RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 LRRC4CQ9HCJ2 640 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 C20orf96Q9NUD7 363 aaPredicted RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 INTS10Q9NVR2 710 aaKnown RBP12.56□□□□□ -0.4
MKS1-206ENST00000577824 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 KLQ9UEF7 1012 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
MKS1-206ENST00000577824 PRR19A6NJB7 356 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 SGTAO43765 313 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 CER1O95813 267 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 FUCA1P04066 466 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 ENGP17813 658 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 RPS3P23396 243 aaKnown RBP eCLIP12.55□□□□□ -0.4
MKS1-206ENST00000577824 MCM3P25205 808 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 PPARGP37231 505 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 NSG1P42857 185 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 PRLHRP49683 370 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 HK3P52790 923 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 IRX4P78413 519 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 TMEM115Q12893 351 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 NEPROQ6NW34 567 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 TRMT10BQ6PF06 316 aaKnown RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 ENPP7Q6UWV6 458 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 ASCL5Q7RTU5 278 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 C11orf96Q7Z7L8 435 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 UNC5BQ8IZJ1 945 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 RBFAQ8N0V3 343 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 GABPB2Q8TAK5 448 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 LPGAT1Q92604 370 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 TCEAL3Q969E4 200 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 ZNF514Q96K75 400 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 LINC00615Q96LM1 132 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 TTC1Q99614 292 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 P2RY12Q9H244 342 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 SMOC1Q9H4F8 434 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 SEMA4GQ9NTN9 838 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 IL1RAPL1Q9NZN1 696 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
MKS1-206ENST00000577824 GPR34Q9UPC5 381 aa12.55□□□□□ -0.4
MKS1-206ENST00000577824 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
MKS1-206ENST00000577824 A0A1B0GTQ1 180 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 TCRBV9S1A1TA0A576 114 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 KLHL33A6NCF5 533 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 FAM159BA6NKW6 160 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 CFAP99D6REC4 459 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 QSOX1O00391 747 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 MTX2O75431 263 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 AP2A2O94973 939 aa12.54□□□□□ -0.4
MKS1-206ENST00000577824 RASGRP1O95267 797 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms