RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 IFI35P80217 286 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 KIF5AQ12840 1032 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 ZNF155Q12901 538 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 DLG1Q12959 904 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SNTA1Q13424 505 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 DHX34Q14147 1143 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 KRT33BQ14525 404 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 EFNB3Q15768 340 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 EIF2S3LQ2VIR3 472 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 ODF3L2Q3SX64 289 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 IRAK1BP1Q5VVH5 260 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 DHRS7BQ6IAN0 325 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 CAPRIN2Q6IMN6 1127 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 WDR73Q6P4I2 378 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 RHBDF2Q6PJF5 856 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 UNQ6126/PRO20091Q6UXV3 157 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SZRD1Q7Z422 152 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SDCCAG8Q86SQ7 713 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 PRPF39Q86UA1 669 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 KMT5CQ86Y97 462 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 CHERPQ8IWX8 916 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 MUC20Q8N307 709 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 C17orf53Q8N3J3 647 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 PCDH20Q8N6Y1 951 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 POMGNT2Q8NAT1 580 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 UTP15Q8TED0 518 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 TMEM255BQ8WV15 326 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 NUDCD2Q8WVJ2 157 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 TMED6Q8WW62 240 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 PRPF31Q8WWY3 499 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 PIGTQ969N2 578 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 TMEM19Q96HH6 336 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 WDFY2Q96P53 400 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 MTERF1Q99551 399 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 SEMA3CQ99985 751 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 MXD3Q9BW11 206 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 AP1M1Q9BXS5 423 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 RTN4RQ9BZR6 473 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 MMP27Q9H306 513 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 MRGBPQ9NV56 204 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 WWOXQ9NZC7 414 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 MRPL15Q9P015 296 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 DNAJB4Q9UDY4 337 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 PPIEQ9UNP9 301 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 MAGED1Q9Y5V3 778 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 CLIC4Q9Y696 253 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 SETD1BQ9UPS6 1966 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 IGHV4OR15-8A0A075B7B6 117 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 A0A1W2PQ09 198 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 A0A1W2PS18 150 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 C1orf226A1L170 272 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 GLOD5A6NK44 160 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 FAM90A26D6RGX4 464 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CTDSP2O14595 271 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 DVL1O14640 695 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CLGNO14967 610 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ATP2A1O14983 1001 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ANKRD28O15084 1053 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 NDUFS4O43181 175 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ZBTB43O43298 467 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PLOD3O60568 738 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 TSPAN1O60635 241 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CLDN14O95500 239 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PMS2P2O95744 297 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 DNTTP04053 509 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PORP16435 677 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 NR2F2P24468 414 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ACADLP28330 430 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 NNMTP40261 264 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 EIF2DP41214 584 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 GAS1P54826 345 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 UBXN2AP68543 259 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SIRPAP78324 504 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PLIN5Q00G26 463 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 POU5F1Q01860 360 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 DDR1Q08345 913 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 BAATQ14032 418 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 ZNF234Q14588 700 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 NFATC4Q14934 902 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 NR1D2Q14995 579 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ALDH1L2Q3SY69 923 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 C18orf63Q68DL7 685 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 LCN10Q6JVE6 187 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SPSB3Q6PJ21 355 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CFAP77Q6ZQR2 320 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 DNAAF5Q86Y56 855 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PM20D2Q8IYS1 436 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 BEST3Q8N1M1 668 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PGBD5Q8N414 524 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 TTC30BQ8N4P2 665 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SLC5A8Q8N695 610 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 RBMXL3Q8N7X1 1067 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 GPATCH11Q8N954 259 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SYT2Q8N9I0 419 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 SLC38A9Q8NBW4 561 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ZNF114Q8NC26 417 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PAPD5Q8NDF8 572 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 TSPAN14Q8NG11 270 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms