RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	FPGT	O14772	594 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	SLC31A1	O15431	190 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	GPR39	O43194	453 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	VEGFD	O43915	354 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	MT-ND3	P03897	115 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ATP1B2	P14415	290 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	PKM	P14618	531 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	MSH3	P20585	1137 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	MAT2A	P31153	395 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	AKT2	P31751	481 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	CA5A	P35218	305 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	PXN	P49023	591 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	TMEM115	Q12893	351 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	INPP5A	Q14642	412 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	IRF4	Q15306	451 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	TMEM31	Q5JXX7	168 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ZNF549	Q6P9A3	640 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	MACC1	Q6ZN28	852 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	C11orf74	Q86VG3	221 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	LONP2	Q86WA8	852 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	TMEM105	Q8N8V8	129 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	DTWD2	Q8NBA8	298 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	PLA2G15	Q8NCC3	412 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	GDAP1	Q8TB36	358 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	RLN3	Q8WXF3	142 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	KLK6	Q92876	244 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	FOXJ1	Q92949	421 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ARL8A	Q96BM9	186 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ALKBH8	Q96BT7	664 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	TLCD1	Q96CP7	247 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	TSPAN17	Q96FV3	270 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ELMO2	Q96JJ3	720 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	CABS1	Q96KC9	395 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	POPDC3	Q9HBV1	291 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	MBNL1	Q9NR56	388 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	LATS2	Q9NRM7	1088 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	GNPTG	Q9UJJ9	305 aa		11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116	NOVA2	Q9UNW9	492 aa	Known RBP	11.78	□□□□□ -0.52
PRPF8-212	ENST00000575116		A0A1W2PPC4	97 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR89A	B7ZAQ6	455 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116		K7ESM1	405 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	RAD51B	O15315	384 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR1I1	O60431	355 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	RFPL1	O75677	317 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	FSBP	O95073	299 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	MPO	P05164	745 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	PCCB	P05166	539 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	IGHV4-34	P06331	123 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR56A5	P0C7T3	313 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR89B	P0CG08	455 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	STMN1	P16949	149 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	CRABP2	P29373	138 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	TYK2	P29597	1187 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	FMO4	P31512	558 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	AKT1	P31749	480 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	SKIV2L2	P42285	1042 aa	Known RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	MAGEA12	P43365	314 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	SERPINB8	P50452	374 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	CSRP3	P50461	194 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	SLC12A2	P55011	1212 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	YPEL5	P62699	121 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	CDK3	Q00526	305 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	B4GALNT1	Q00973	533 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	BMPR2	Q13873	1038 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	USP10	Q14694	798 aa	Known RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	HECTD2	Q5U5R9	776 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	UGT3A1	Q6NUS8	523 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	PELI3	Q8N2H9	469 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	PNPLA1	Q8N8W4	532 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPATCH11	Q8N954	259 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	KCNJ9	Q92806	393 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	BIRC7	Q96CA5	298 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	ATXN7L3B	Q96GX2	97 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF514	Q96K75	400 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	APOO	Q9BUR5	198 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	BOC	Q9BWV1	1114 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	TSSK1B	Q9BXA7	367 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	WDR26	Q9H7D7	661 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	SSU72	Q9NP77	194 aa	Known RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	TAS2R13	Q9NYV9	303 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	KLHL42	Q9P2K6	505 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	MBD1	Q9UIS9	605 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	SLC39A10	Q9ULF5	831 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR34	Q9UPC5	381 aa		11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.77	□□□□□ -0.53
PRPF8-212	ENST00000575116		A0A1W2PPM1	405 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	INPP4B	O15327	924 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	MAP3K13	O43283	966 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	VPS26A	O75436	327 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	CDK14	O94921	469 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	ALDOA	P04075	364 aa	Known RBP	11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	GSTM1	P09488	218 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	MYCLP1	P12525	358 aa	Predicted RBP	11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	FDXR	P22570	491 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	CD27	P26842	260 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	AVPR2	P30518	371 aa		11.76	□□□□□ -0.53
PRPF8-212	ENST00000575116	IGFALS	P35858	605 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms