RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MAPRE2Q15555 327 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 TEAD2Q15562 447 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 MMEL1Q495T6 779 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 FUT11Q495W5 492 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 AGKQ53H12 422 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 TXNDC11Q6PKC3 985 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 SNX20Q7Z614 316 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 ZSWIM9Q86XI8 627 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 TMEM25Q86YD3 366 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 GPSM1Q86YR5 675 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 NAT14Q8WUY8 206 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 MRPL1Q9BYD6 325 aaKnown RBP13.92□□□□□ -0.18
VPS33B-208ENST00000574755 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
VPS33B-208ENST00000574755 S100A14Q9HCY8 104 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 IL26Q9NPH9 171 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 UTP6Q9NYH9 597 aaKnown RBP13.92□□□□□ -0.18
VPS33B-208ENST00000574755 CD274Q9NZQ7 290 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 HECAQ9UBI9 543 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-208ENST00000574755 TSR3Q9UJK0 312 aaKnown RBP13.92□□□□□ -0.18
VPS33B-208ENST00000574755 PTGDR2Q9Y5Y4 395 aa13.92□□□□□ -0.18
VPS33B-208ENST00000574755 GLYATL1P3A0A0U1RQE8 302 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 VGLL3A8MV65 326 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 CRCPO75575 148 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
VPS33B-208ENST00000574755 AGTR2P50052 363 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 PPIGQ13427 754 aaKnown RBP eCLIP13.91□□□□□ -0.184e-6■■■□□ 15.5
VPS33B-208ENST00000574755 RBFAQ8N0V3 343 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 HMGCLL1Q8TB92 370 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 N4BP2L2Q92802 583 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-208ENST00000574755 CCDC97Q96F63 343 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-208ENST00000574755 BOCQ9BWV1 1114 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 AKTIPQ9H8T0 292 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 HS3ST2Q9Y278 367 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 DHRS7Q9Y394 339 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 A0A1B0GTL3 188 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 NPIPB15A6NHN6 443 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-208ENST00000574755 GRM6O15303 877 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 KLK8O60259 260 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 BPIP17213 487 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 STX1BP61266 288 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 STX5Q13190 355 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 TGFBIQ15582 683 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 CDKN3Q16667 212 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 C22orf39Q6P5X5 142 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 TSPAN33Q86UF1 283 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 SNX31Q8N9S9 440 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 POF1BQ8WVV4 589 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 BADQ92934 168 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 LMLNQ96KR4 655 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 BBS2Q9BXC9 721 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 TDP1Q9NUW8 608 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 CRLS1Q9UJA2 301 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 GNPTGQ9UJJ9 305 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 SLC25A13Q9UJS0 675 aa13.91□□□□□ -0.18
VPS33B-208ENST00000574755 MAP3K7O43318 606 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 TLL1O43897 1013 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PTPN2P17706 415 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ITGB6P18564 788 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 UGT1A6P19224 532 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ATP6V1C1P21283 382 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 UGT1A1P22309 533 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 UGT1A4P22310 534 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 CA5AP35218 305 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 UGT1A3P35503 534 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 UGT1A5P35504 534 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 HK3P52790 923 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 THOP1P52888 689 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PKNOX1P55347 436 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 SEMG2Q02383 582 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PTK2BQ14289 1009 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PIGGQ5H8A4 983 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 FRA10AC1Q70Z53 315 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 CLDN19Q8N6F1 224 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 GRIN3AQ8TCU5 1115 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ESAMQ96AP7 390 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 RAD9AQ99638 391 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 C19orf43Q9BQ61 176 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 C17orf80Q9BSJ5 609 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ZDHHC6Q9H6R6 413 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PRKAG2Q9UGJ0 569 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 PCTPQ9UKL6 214 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 GIPC1O14908 333 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 FGF19O95750 216 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 MLYCDO95822 493 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 RHOP08100 348 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ALDOCP09972 364 aaKnown RBP13.9□□□□□ -0.18
VPS33B-208ENST00000574755 DDX6P26196 483 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms