RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SERPINB8P50452 374 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 B4GALNT1Q00973 533 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 HECTD2Q5U5R9 776 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 PNCKQ6P2M8 343 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 TRIM74Q86UV6 250 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 DDHD1Q8NEL9 900 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 LENG8Q96PV6 779 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 OLFM1Q99784 485 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 AARSD1Q9BTE6 412 aaKnown RBP23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 GPR174Q9BXC1 333 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 C1QTNF7Q9BXJ2 289 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CLPBQ9H078 707 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 SNX15Q9NRS6 342 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 DOCK9Q9BZ29 2069 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 PRMT5O14744 637 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 SLC25A14O95258 325 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 KRT4P19013 534 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CDKN2DP55273 166 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 TAS2R39P59534 338 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 ITIH4Q14624 930 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CTSL3PQ5NE16 218 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 TIFABQ6ZNK6 161 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 SPNS2Q8IVW8 549 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CENPTQ96BT3 561 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 FAM136AQ96C01 138 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CCDC68Q9H2F9 335 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 CORO1CQ9ULV4 474 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 PRSS21Q9Y6M0 314 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 NCOR1O75376 2440 aa23.8■■□□□ 1.4
ATPAF1-213ENST00000574428 IGLV3-16A0A075B6K0 115 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 PYGBP11216 843 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 TYK2P29597 1187 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 ADARP55265 1226 aaKnown RBP23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 DMWDQ09019 674 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 DNAJC3Q13217 504 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 ZNF460Q14592 562 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 TSSK4Q6SA08 328 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 MAMSTRQ6ZN01 415 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 PHYKPLQ8IUZ5 450 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 CEP97Q8IW35 865 aa23.79■■□□□ 1.4
ATPAF1-213ENST00000574428 ESR1P03372 595 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PKMP14618 531 aaKnown RBP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 HPDP32754 393 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 GMPRP36959 345 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 POU4F1Q01851 419 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 INPP5AQ14642 412 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PPM1JQ5JR12 505 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 LDLRAP1Q5SW96 308 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 FAM45BPQ6NSW5 357 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 ADAMTSL4Q6UY14 1074 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 DET1Q7L5Y6 550 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PIM3Q86V86 326 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 HEATR4Q86WZ0 1026 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 FAM45AQ8TCE6 357 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 ISL2Q96A47 359 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PCMTD2Q9NV79 361 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 VWA7Q9Y334 891 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 A0A0C4DFX4 3053 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 C10orf142B7Z368 130 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 AXIN1O15169 862 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PHGDHO43175 533 aaKnown RBP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 NIPSNAP2O75323 286 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 FSBPO95073 299 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 IGHV4-34P06331 123 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 RPS3P23396 243 aaKnown RBP eCLIP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 IGFALSP35858 605 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 NSG1P42857 185 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 SLC12A2P55011 1212 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PPARDQ03181 441 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 KIAA0895LQ68EN5 471 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 PTRHD1Q6GMV3 140 aaKnown RBP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 ASB12Q8WXK4 309 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 DCUN1D1Q96GG9 259 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 SMC6Q96SB8 1091 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 SENP1Q9P0U3 644 aa23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 MBD1Q9UIS9 605 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-213ENST00000574428 IQCF5A8MTL0 148 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 LATO43561 262 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 STMN1P16949 149 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 MSH3P20585 1137 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 MAGEA12P43365 314 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 TIAL1Q01085 375 aaKnown RBP eCLIP23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 ILF2Q12905 390 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 SH2D5Q6ZV89 423 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 HIC2Q96JB3 615 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 PSD3Q9NYI0 1048 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 GNPTGQ9UJJ9 305 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 MED16Q9Y2X0 877 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 OR1A2Q9Y585 309 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 PCDHB1Q9Y5F3 818 aa23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 OAS3Q9Y6K5 1087 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-213ENST00000574428 SPAG7O75391 227 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 RHOBTB1O94844 696 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 PYGLP06737 847 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 BRAFP15056 766 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 FDXRP22570 491 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 POLD2P49005 469 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 RAB10P61026 200 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 PDE1CQ14123 709 aaPredicted RBP23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 ZKSCAN8Q15776 578 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms