RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 C8orf86Q6ZUL3 223 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 B4GALNT4Q76KP1 1039 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 KDELC2Q7Z4H8 507 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 NT5DC3Q86UY8 548 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 HEATR4Q86WZ0 1026 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 GAS2L3Q86XJ1 694 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 RAVER1Q8IY67 606 aaKnown RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 NRSN1Q8IZ57 195 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 ARL10Q8N8L6 244 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 LPCAT1Q8NF37 534 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 GPR156Q8NFN8 814 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 OR6C4Q8NGE1 309 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 EXD1Q8NHP7 514 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CCL4L1Q8NHW4 92 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 HNRNPLLQ8WVV9 542 aaKnown RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 SCAMP4Q969E2 229 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 GRAMD1AQ96CP6 724 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 AP2M1Q96CW1 435 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 AGAP3Q96P47 875 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 OLFM3Q96PB7 478 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 LYSMD1Q96S90 227 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 MDFIQ99750 246 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CCDC3Q9BQI4 270 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 ADGRE3Q9BY15 652 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 DPEP2Q9H4A9 486 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CARS2Q9HA77 564 aaKnown RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 SEPT10Q9P0V9 454 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 SAE1Q9UBE0 346 aaPredicted RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 TFR2Q9UP52 801 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.4□□□□□ -1.22
NUP88-205ENST00000572809 PCDHB1Q9Y5F3 818 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 FRYQ5TBA9 3013 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 MYLKQ15746 1914 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 CAPN8A6NHC0 703 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TCEA3O75764 348 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 IPO7O95373 1038 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 GLB1P16278 677 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 ACTN2P35609 894 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 GNPDA1P46926 289 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 LSSP48449 732 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 POLD2P49005 469 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 STC1P52823 247 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 NAP1L1P55209 391 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 CDK18Q07002 472 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TAZQ16635 292 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TFDP3Q5H9I0 405 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 CCDC70Q6NSX1 233 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 ADAMTSL4Q6UY14 1074 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 RBM44Q6ZP01 1051 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 DAAM2Q86T65 1068 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 NRROSQ86YC3 692 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 CCDC50Q8IVM0 306 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 KATNAL2Q8IYT4 538 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 LSMEM2Q8N112 164 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 KYQ8NBH2 561 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 CCHCR1Q8TD31 782 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 GPBAR1Q8TDU6 330 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TFB1MQ8WVM0 346 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 P3H4Q92791 437 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 FGF11Q92914 225 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 IMP4Q96G21 291 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 HIC2Q96JB3 615 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TEKT5Q96M29 485 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TMEM74Q96NL1 305 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 AGAP2Q99490 1192 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 RIOK2Q9BVS4 552 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 GSDMCQ9BYG8 508 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 CEP41Q9BYV8 373 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 FRMD8Q9BZ67 464 aaPredicted RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 SLC25A51Q9H1U9 297 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 FAM83DQ9H4H8 585 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 GLOD4Q9HC38 313 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 SPATS2LQ9NUQ6 558 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 TRNAU1APQ9NX07 287 aaKnown RBP7.39□□□□□ -1.23
NUP88-205ENST00000572809 PKD2L2Q9NZM6 624 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 LRIT1Q9P2V4 623 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 SUFUQ9UMX1 484 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 SLC17A4Q9Y2C5 497 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 TMEM98Q9Y2Y6 226 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 DUSP10Q9Y6W6 482 aa7.39□□□□□ -1.23
NUP88-205ENST00000572809 hCG_1818297A0A087WSY0 165 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 A0A087WV48 116 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 C1orf232A0A0U1RR37 186 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 RGSL1A5PLK6 1076 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 B4DGG1 531 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 NTN3O00634 580 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 CASC3O15234 703 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 INPP4BO15327 924 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 RRP8O43159 456 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 MTSS1O43312 755 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 TLX3O43711 291 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 NOBOXO60393 691 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 BRINP1O60477 761 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ASMTLO95671 621 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 SOD1P00441 154 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ALBP02768 609 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms