RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PACS1Q6VY07 963 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CYS1Q717R9 158 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 LPCAT2Q7L5N7 544 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 BMP8AQ7Z5Y6 402 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 TECPR1Q7Z6L1 1165 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 STRA8Q7Z7C7 330 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SERPINA9Q86WD7 417 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 HEATR4Q86WZ0 1026 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CILP2Q8IUL8 1156 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 DENND6AQ8IWF6 608 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CNTN4Q8IWV2 1026 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 RGL4Q8IZJ4 473 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 NXPE1Q8N323 547 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPATCH11Q8N954 259 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CADM4Q8NFZ8 388 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR2W6PQ8NHA6 318 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 EPS8L3Q8TE67 593 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ASB12Q8WXK4 309 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ANKRD7Q92527 254 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 KLK6Q92876 244 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SCAMP4Q969E2 229 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 GLYATL1Q969I3 302 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 EID2BQ96D98 161 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ATXN7L3BQ96GX2 97 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SERAC1Q96JX3 654 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PKNOX2Q96KN3 472 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 HSPA12BQ96MM6 686 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 VPS35Q96QK1 796 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 TCF12Q99081 682 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ABCG8Q9H221 673 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM96AQ9H5X1 160 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 VIPAS39Q9H9C1 493 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FZD3Q9NPG1 666 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 IL26Q9NPH9 171 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBXO6Q9NRD1 293 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 MOCS1Q9NZB8 636 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 VPS18Q9P253 973 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FETUBQ9UGM5 382 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC24A2Q9UI40 661 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 GNPTGQ9UJJ9 305 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZMIZ1Q9ULJ6 1067 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CORO1CQ9ULV4 474 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZFR2Q9UPR6 939 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 C5orf42Q9H799 3197 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 UNC80Q8N2C7 3258 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 FADS2P1A8MWK0 482 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 H3BMM5 538 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 LCE2BO14633 110 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRMT5O14744 637 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 RGS16O15492 202 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 LATO43561 262 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 OPA1O60313 960 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 VPS26AO75436 327 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ASMTLO95671 621 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PAK4O96013 591 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SHBGP04278 402 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR56A5P0C7T3 313 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MYCLP1P12525 358 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PSMA3P25788 255 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 AVPR2P30518 371 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 IGFALSP35858 605 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 NSG1P42857 185 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PTGER3P43115 390 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 DHPSP49366 369 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SERPINB8P50452 374 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 LIMK2P53671 638 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 XIAPP98170 497 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MPP1Q00013 466 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 CDK3Q00526 305 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 CLN3Q13286 438 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 CTBP1Q13363 440 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ANGPT1Q15389 498 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 DBN1Q16643 649 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 WSCD2Q2TBF2 565 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATP13A5Q4VNC0 1218 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SYTL3Q4VX76 610 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TAF1BQ53T94 588 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 UBAP2Q5T6F2 1119 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPRC6AQ5T6X5 926 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TEDDM1Q5T9Z0 273 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 GRTP1Q5TC63 336 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 LYSMD4Q5XG99 296 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PTRHD1Q6GMV3 140 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM45BPQ6NSW5 357 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 KYAT3Q6YP21 454 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 RFLNAQ6ZTI6 216 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ARMCX6Q7L4S7 300 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 GALNT7Q86SF2 657 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 LDB1Q86U70 411 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRAPPC5Q8IUR0 188 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TP53I13Q8NBR0 393 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 DDHD1Q8NEL9 900 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms