RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IFNKQ9P0W0 207 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF624Q9P2J8 865 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 DNPEPQ9ULA0 475 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 CAPN11Q9UMQ6 739 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 RPL26L1Q9UNX3 145 aaKnown RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC30A1Q9Y6M5 507 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 LRRK2Q5S007 2527 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIR2DS5A0A0G2JLQ3 304 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 A0A0G2JNG1 304 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 F5H423 210 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIR2DS3K7RE56 304 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 AURKAO14965 403 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIF1CO43896 1103 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 VIPP01282 170 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KRT7P08729 469 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 AMD1P17707 334 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 NR1D1P20393 614 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 F8A1P23610 371 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KDELR1P24390 212 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 MAP4P27816 1152 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 CASP14P31944 242 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC19A1P41440 591 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 LEPRP48357 1165 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 DRG2P55039 364 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 DYNLT1P63172 113 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 TPM4P67936 248 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 CDC20Q12834 499 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIR2DS5Q14953 304 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 LLGL1Q15334 1064 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 INSCQ1MX18 579 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 KHDC1Q4VXA5 237 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF569Q5MCW4 686 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ADGRG6Q86SQ4 1221 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRIM48Q8IWZ4 208 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 PLD5Q8N7P1 536 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPATA22Q8NHS9 363 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 CTNNBL1Q8WYA6 563 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 STARD8Q92502 1023 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 FATE1Q969F0 183 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 RNF25Q96BH1 459 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 FAF2Q96CS3 445 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 HDAC11Q96DB2 347 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 TEFMQ96QE5 360 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ADGRE3Q9BY15 652 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPR63Q9BZJ6 419 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ULBP3Q9BZM4 244 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 CARD9Q9H257 536 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ADNPQ9H2P0 1102 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 RMI1Q9H9A7 625 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRIM39Q9HCM9 518 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 FBXO8Q9NRD0 319 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 HAUS2Q9NVX0 235 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 UBP1Q9NZI7 540 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 OGFRQ9NZT2 677 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 AMACRQ9UHK6 382 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF711Q9Y462 761 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
CTDNEP1-203ENST00000570385 RGSL1A5PLK6 1076 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 OR5K4A6NMS3 321 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 OR52A4PA6NMU1 304 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 APOL1O14791 398 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 CAPN5O15484 640 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 PMPCBO75439 489 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 KATNA1O75449 491 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 RASSF9O75901 435 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 MTA2O94776 668 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 UBXN7O94888 489 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 MT-CYBP00156 380 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 H2AFZP0C0S5 128 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC2A4P14672 509 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF7P17097 686 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 BPIP17213 487 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 TCN2P20062 427 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 MAN1A1P33908 653 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 DLSTP36957 453 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 NOP2P46087 812 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 EPHA4P54764 986 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 UBE2IP63279 158 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 IFI35P80217 286 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 PPIDQ08752 370 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 ERV3-1Q14264 604 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 NOMO1Q15155 1222 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 FAM92BQ6ZTR7 304 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 TMEM26Q6ZUK4 368 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 H2AFVQ71UI9 128 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 TMEM135Q86UB9 458 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 NT5DC3Q86UY8 548 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 RFX6Q8HWS3 928 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 PLXDC1Q8IUK5 500 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 GALNT6Q8NCL4 622 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 C9orf43Q8TAL5 461 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 RSC1A1Q92681 617 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 GLYATL1Q969I3 302 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 ABHD17AQ96GS6 310 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 C9orf72Q96LT7 481 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 CATSPER2Q96P56 530 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms