RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 WNT3AP56704 352 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 HHEXQ03014 270 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 COL9A2Q14055 689 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 NOMO1Q15155 1222 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 AMZ1Q400G9 498 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PHF19Q5T6S3 580 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KAZNQ674X7 775 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC9B2Q86UD5 537 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 OR10G6Q8NH81 332 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KRT35Q92764 455 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 OXNAD1Q96HP4 312 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCDC74BQ96LY2 380 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TIMM29Q9BSF4 260 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 STN1Q9H668 368 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SPO11Q9Y5K1 396 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 LILRA5A6NI73 299 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SOWAHDA6NJG2 315 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 EIF4E1BA6NMX2 242 aaKnown RBP16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 C9orf172C9J069 976 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KMOO15229 486 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DUX1O43812 170 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ACP5P13686 325 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 XRCC1P18887 633 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CTNNA2P26232 953 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC1A5Q15758 541 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SIRPB2Q5JXA9 342 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ARHGAP40Q5TG30 622 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TMEM164Q5U3C3 297 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 WASH2PQ6VEQ5 465 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 USP53Q70EK8 1073 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 B4GALNT4Q76KP1 1039 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KDELC2Q7Z4H8 507 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZC3H18Q86VM9 953 aaKnown RBP16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 AGBL5Q8NDL9 886 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TTC9Q92623 222 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC38A3Q99624 504 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DDA1Q9BW61 102 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 OR2AG1Q9H205 316 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 WASH6PQ9NQA3 447 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 IL17CQ9P0M4 197 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TFR2Q9UP52 801 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 REXO2Q9Y3B8 237 aaKnown RBP16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PRKAB1Q9Y478 270 aa16.87■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CFAP46Q8IYW2 2715 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PRAMEF33A0A0G2JMD5 474 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 B4E171 279 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 AURKAO14965 403 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PRAMEF10O60809 474 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KCNJ13O60928 360 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TSPAN7P41732 249 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 UBE2IP63279 158 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ALS2CLQ60I27 953 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCDC81Q6ZN84 652 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PID1Q7Z2X4 250 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ARHGAP22Q7Z5H3 698 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 LRRTM4Q86VH4 590 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 JAMLQ86YT9 394 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 LRRC57Q8N9N7 239 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 BRSK1Q8TDC3 778 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 USP7Q93009 1102 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TAAR9Q96RI9 348 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RBSNQ9H1K0 784 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 GBA3Q9H227 469 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TMPRSS11EQ9UL52 423 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KCNK6Q9Y257 313 aa16.86■□□□□ 0.29
MAP1LC3B-208ENST00000570189 EFSO43281 561 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 C1QL1O75973 258 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 FGF3P11487 239 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZNF7P17097 686 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TNNT3P45378 269 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 VAV2P52735 878 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 AGAP9Q5VTM2 703 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 NKAIN2Q5VXU1 208 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 C11orf96Q7Z7L8 435 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZNF547Q8IVP9 402 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KLHDC8BQ8IXV7 354 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 BMPERQ8N8U9 685 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 FERMT1Q9BQL6 677 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 IL26Q9NPH9 171 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KLC4Q9NSK0 619 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SMOXQ9NWM0 555 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 FOXJ2Q9P0K8 574 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CPNE7Q9UBL6 633 aa16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 MN1Q10571 1320 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ANXA9O76027 345 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCL4P13236 92 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CSTF2P33240 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms