RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PNMA6AP0CW24 399 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 UNGP13051 313 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CHN1P15882 459 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 PRLRP16471 622 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CD58P19256 250 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CDH5P33151 784 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 GSCP56915 257 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 GPC5P78333 572 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 HSD11B2P80365 405 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 ROR1Q01973 937 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 NHLH2Q02577 135 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TAP1Q03518 808 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3GQ6DHY5 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3CQ6IPX1 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 SLC22A25Q6T423 547 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 SYT10Q6XYQ8 523 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 SCARA5Q6ZMJ2 495 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 LIMS2Q7Z4I7 341 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 PHF13Q86YI8 300 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3Q8IZP1 549 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 FAM109AQ8N4B1 249 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF366Q8N895 744 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 C11orf44Q8N8P7 122 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 APPL2Q8NEU8 664 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 SLC20A1Q8WUM9 679 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 ZNF606Q8WXB4 792 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 FAM120BQ96EK7 910 aaKnown RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 HAPLN3Q96S86 360 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 MMS19Q96T76 1030 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TXLNGYQ9BZA5 131 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 BRF2Q9HAW0 419 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 WDR35Q9P2L0 1181 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 SLC25A10Q9UBX3 287 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TUBGCP4Q9UGJ1 667 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 KCNE5Q9UJ90 142 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CNOT6Q9ULM6 557 aaKnown RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 USP15Q9Y4E8 981 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 PCDHB7Q9Y5E2 793 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 MAGED1Q9Y5V3 778 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 PIAS3Q9Y6X2 628 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TSC2P49815 1807 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 LTBP2Q14767 1821 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 MACROD2A1Z1Q3 448 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SH2D7A6NKC9 451 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM189-UBE2V1I3L0A0 370 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 FFAR3O14843 346 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 NKX2-8O15522 239 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TRAPPC3O43617 180 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 CLTBP09497 229 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 CSH1P0DML2 217 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 CSH2P0DML3 217 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 ODC1P11926 461 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 CHRNB2P17787 502 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TCP1P17987 556 aaKnown RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 MMP8P22894 467 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 WARSP23381 471 aaKnown RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 GRK5P34947 590 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 BSGP35613 385 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 LHX1P48742 406 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 HARS2P49590 506 aaKnown RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 LBX1P52954 281 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 GALCP54803 685 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SLC8A3P57103 927 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 RPS3AP61247 264 aaKnown RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 FPGSQ05932 587 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 MTAPQ13126 283 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 DCTN2Q13561 401 aaKnown RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SSPNQ14714 243 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 GLRA4Q5JXX5 417 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TAF3Q5VWG9 929 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 METRNLQ641Q3 311 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 FAM90A2PQ658T7 463 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 C11orf63Q6NUN7 778 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 ADGRG5Q8IZF4 528 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SLC35F6Q8N357 371 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 RFWD2Q8NHY2 731 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 OLIG1Q8TAK6 271 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 NELL1Q92832 810 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 C18orf25Q96B23 403 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-222ENST00000570139 FAM136AQ96C01 138 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 VPS50Q96JG6 964 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 RPGRIP1Q96KN7 1286 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 GAD1Q99259 594 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SNX25Q9H3E2 840 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SMYD3Q9H7B4 428 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 HCN3Q9P1Z3 774 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 RNF14Q9UBS8 474 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 RPS6KA6Q9UK32 745 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TBX21Q9UL17 535 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SORCS3Q9UPU3 1222 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 SNX9Q9Y5X1 595 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 TRIP11Q15643 1979 aa7.22□□□□□ -1.25
CNOT1-222ENST00000570139 A8MVJ9 347 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 MIF4GDA9UHW6 222 aaKnown RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 PSMD9O00233 223 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ETV2O00321 342 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 HYAL3O43820 417 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms