RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 DGKBQ9Y6T7 804 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 LAMA1P25391 3075 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 BPTFQ12830 3046 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 IGLV3-16A0A075B6K0 115 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 GDF9O60383 454 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 CER1O95813 267 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 IVLP07476 585 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF8P17098 575 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-222ENST00000568034 ACRV1P26436 265 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 EPHA8P29322 1005 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-222ENST00000568034 HK3P52790 923 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 DBN1Q16643 649 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 LDLRAP1Q5SW96 308 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 CENPUQ71F23 418 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 KANSL1Q7Z3B3 1105 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 SERPINA9Q86WD7 417 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 PHACTR4Q8IZ21 702 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 UNC5BQ8IZJ1 945 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 FBXO36Q8NEA4 188 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 IFT81Q8WYA0 676 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 ULK4Q96C45 1275 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 NAT9Q9BTE0 207 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 SAYSD1Q9NPB0 183 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 DNAAF2Q9NVR5 837 aaKnown RBP17.8■□□□□ 0.44
COMMD4-222ENST00000568034 DNAJC28Q9NX36 388 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 SUFUQ9UMX1 484 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 FAM169AQ9Y6X4 670 aa17.8■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF292O60281 2723 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 GOLGA8KD6RF30 607 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 GOLGA8TH3BQL2 631 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 SCAMP1O15126 338 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 SGTAO43765 313 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 NUAK1O60285 661 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 PIAS2O75928 621 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 RASGRP1O95267 797 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 TTC4O95801 387 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 POLBP06746 335 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 PAMP19021 973 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 IL9RQ01113 521 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 PPARDQ03181 441 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 CUL1Q13616 776 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 SPANXN3Q5MJ09 141 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 MARK2Q7KZI7 788 aaKnown RBP17.79■□□□□ 0.44
COMMD4-222ENST00000568034 CCNJLQ8IV13 435 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 HID1Q8IV36 788 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 ZBED8Q8IZ13 594 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
COMMD4-222ENST00000568034 NAT14Q8WUY8 206 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 CFAP36Q96G28 342 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 LRRC61Q9BV99 259 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 BOCQ9BWV1 1114 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 ANKZF1Q9H8Y5 726 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 CYP4F12Q9HCS2 524 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 CATSPERZQ9NTU4 200 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 ZDHHC3Q9NYG2 299 aa17.79■□□□□ 0.44
COMMD4-222ENST00000568034 ZC3H7BQ9UGR2 993 aaKnown RBP17.79■□□□□ 0.44
COMMD4-222ENST00000568034 PTPRZ1P23471 2315 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 TDRD6O60522 2096 aaKnown RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CHUKO15111 745 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 VEGFDO43915 354 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 FOXD2O60548 495 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 ASMTLO95671 621 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CELA2BP08218 269 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 JUNDP17535 347 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CCT8P50990 548 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CTSCP53634 463 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 TMEM115Q12893 351 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 BNIP3Q12983 259 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 LONRF1Q17RB8 773 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 AASDHQ4L235 1098 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 PYCR3Q53H96 274 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 TAS2R42Q7RTR8 314 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 LDB1Q86U70 411 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF547Q8IVP9 402 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 IFT20Q8IY31 132 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 GPR161Q8N6U8 529 aaKnown RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 RASGEF1AQ8N9B8 481 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 GPR150Q8NGU9 434 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 GDAP1Q8TB36 358 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 SAP25Q8TEE9 199 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CARS2Q9HA77 564 aaKnown RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 APOBEC3BQ9UH17 382 aaKnown RBP17.78■□□□□ 0.44
COMMD4-222ENST00000568034 ST14Q9Y5Y6 855 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 WDR87Q6ZQQ6 2873 aa17.78■□□□□ 0.44
COMMD4-222ENST00000568034 CD3EAPO15446 510 aaKnown RBP17.77■□□□□ 0.44
COMMD4-222ENST00000568034 DFNA5O60443 496 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 SDC3O75056 442 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 TNFP01375 233 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF883P0CG24 379 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 GIMD1P0DJR0 217 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 GNPDA1P46926 289 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 ARRB1P49407 418 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-222ENST00000568034 ATXN3P54252 364 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-222ENST00000568034 FRG1Q14331 258 aaKnown RBP17.77■□□□□ 0.44
COMMD4-222ENST00000568034 HLTFQ14527 1009 aaKnown RBP eCLIP17.77■□□□□ 0.44
COMMD4-222ENST00000568034 ITIH4Q14624 930 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 TYSND1Q2T9J0 566 aa17.77■□□□□ 0.44
COMMD4-222ENST00000568034 FASTKD1Q53R41 847 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms