RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 MRGPRX2Q96LB1 330 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 PLEKHG4BQ96PX9 1271 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 CMKLR1Q99788 373 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 OSBPL8Q9BZF1 889 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 CARD9Q9H257 536 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 SEMA6CQ9H3T2 930 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 TRABDQ9H4I3 376 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 C10orf88Q9H8K7 445 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 RDH14Q9HBH5 336 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 BPIFA1Q9NP55 256 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 ARFGAP3Q9NP61 516 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 RRAGDQ9NQL2 400 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-209ENST00000567635 KCNK4Q9NYG8 393 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 HACD3Q9P035 362 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 AKAP7Q9P0M2 348 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-209ENST00000567635 NFKBIL1Q9UBC1 381 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-209ENST00000567635 TBC1D29Q9UFV1 150 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 RSPH14Q9UHP6 348 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 AMFRQ9UKV5 643 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 KCNK6Q9Y257 313 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 PCDHGA7Q9Y5G6 932 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 SPO11Q9Y5K1 396 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 PCM1Q15154 2024 aa6.84□□□□□ -1.31
SF3B3-209ENST00000567635 ZNF106Q9H2Y7 1883 aaKnown RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 MGAQ8IWI9 3026 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 IGHV1OR21-1A0A087WYE8 117 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 KIR2DS5A0A0G2JLQ3 304 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 A0A0G2JNG1 304 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 IGHV5-10-1A0A0J9YXX1 117 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 MACROD2A1Z1Q3 448 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 GRID2IPA4D2P6 1211 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 OR5K4A6NMS3 321 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 MIF4GDA9UHW6 222 aaKnown RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 F5H423 210 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 KIR2DS3K7RE56 304 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 AGRPO00253 132 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CHUKO15111 745 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SNX2O60749 519 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PPFIA2O75334 1257 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CDK14O94921 469 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 EML2O95834 649 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SLC4A1P02730 911 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 RBP3P10745 1247 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 HGFP14210 728 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF7P17097 686 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 HLA-DPA1P20036 260 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CHRNA4P43681 627 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 FASLGP48023 281 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 LIMK2P53671 638 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TMPRSS3P57727 454 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 GPLD1P80108 840 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 OTUD4Q01804 1114 aaKnown RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TRA2AQ13595 282 aaKnown RBP eCLIP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PRPSAP1Q14558 356 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 KIR2DS5Q14953 304 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 MAP9Q49MG5 647 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SOWAHCQ53LP3 525 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ANKRD20A2Q5SQ80 823 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ANKRD20A1Q5TYW2 823 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ANKRD20A3Q5VUR7 823 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 NKAIN2Q5VXU1 208 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ZDHHC20Q5W0Z9 365 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 ITPRIPL1Q6GPH6 555 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 RANBP10Q6VN20 620 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SLC9B2Q86UD5 537 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 LRRTM4Q86VH4 590 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PHYKPLQ8IUZ5 450 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM139Q8IV31 216 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 CDKL3Q8IVW4 592 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SYCE1Q8N0S2 351 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TTC30BQ8N4P2 665 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 UBL4BQ8N7F7 174 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TTC13Q8NBP0 860 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SPC24Q8NBT2 197 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 IPMKQ8NFU5 416 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 OR4D9Q8NGE8 314 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 OR10G6Q8NH81 332 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 DTX3LQ8TDB6 740 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 BRSK1Q8TDC3 778 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 BLOC1S5Q8TDH9 187 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SLC37A2Q8TED4 501 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PDLIM2Q96JY6 352 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 TTC25Q96NG3 672 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 FCRL3Q96P31 734 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-209ENST00000567635 VPS35Q96QK1 796 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SLC38A3Q99624 504 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 NUDT22Q9BRQ3 303 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 HERPUD2Q9BSE4 406 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 FSD1LQ9BXM9 530 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 B3GNT4Q9C0J1 378 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 GBA3Q9H227 469 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 IL26Q9NPH9 171 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PRDM8Q9NQV8 689 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 KLC4Q9NSK0 619 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 IL17CQ9P0M4 197 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 PISDQ9UG56 409 aa6.83□□□□□ -1.32
SF3B3-209ENST00000567635 SLC23A2Q9UGH3 650 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms