RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TTC1Q99614 292 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 POPDC3Q9HBV1 291 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 CD248Q9HCU0 757 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 ZDHHC3Q9NYG2 299 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 SIRPGQ9P1W8 387 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 COPG2Q9UBF2 871 aa17.53■□□□□ 0.4
HERC2-208ENST00000566635 OAS3Q9Y6K5 1087 aaKnown RBP17.53■□□□□ 0.4
HERC2-208ENST00000566635 RGSL1A5PLK6 1076 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 VPS26AO75436 327 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 RECQL5O94762 991 aaPredicted RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 ITGB6P18564 788 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 PPARGP37231 505 aaPredicted RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 MRPS21P82921 87 aaKnown RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 SF3A3Q12874 501 aaKnown RBP eCLIP17.52■□□□□ 0.4
HERC2-208ENST00000566635 TSNAXIP1Q2TAA8 658 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 ZNF284Q2VY69 593 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 HABP4Q5JVS0 413 aaKnown RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 ZCCHC23Q6ZST2 131 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 TRMT11Q7Z4G4 463 aaKnown RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 LCA5Q86VQ0 697 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 NUDCD3Q8IVD9 361 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 C10orf107Q8IVU9 208 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 CD200R1Q8TD46 325 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 CXorf40AQ8TE69 158 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 KCNJ9Q92806 393 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 RAB7BQ96AH8 199 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 ULK4Q96C45 1275 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 COPS8Q99627 209 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 MANSC1Q9H8J5 431 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 SARS2Q9NP81 518 aaKnown RBP17.52■□□□□ 0.4
HERC2-208ENST00000566635 RAD18Q9NS91 495 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 SMOXQ9NWM0 555 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 GNPTGQ9UJJ9 305 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 CA14Q9ULX7 337 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 DUSP12Q9UNI6 340 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 PCDHB1Q9Y5F3 818 aa17.52■□□□□ 0.4
HERC2-208ENST00000566635 E5RI56 91 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 G3V2L1 256 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 MTX2O75431 263 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 RNASEH2AO75792 299 aaKnown RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 FAM107AO95990 144 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 CHRM3P20309 590 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 ITIH4Q14624 930 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 CHI3L2Q15782 390 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 PTRHD1Q6GMV3 140 aaKnown RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 NUS1Q96E22 293 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 ZSCAN5AQ9BUG6 496 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 MBD1Q9UIS9 605 aaPredicted RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 COMMD10Q9Y6G5 202 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 BIRC5O15392 142 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 LZTS3O60299 673 aaPredicted RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 CLCN7P51798 805 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 MLF2Q15773 248 aaPredicted RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 FAM83EQ2M2I3 478 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 KHDC1Q4VXA5 237 aaKnown RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 TECRLQ5HYJ1 363 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 ZNF648Q5T619 568 aaPredicted RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 CYP2U1Q7Z449 544 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 TMPRSS6Q8IU80 811 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 NRSN1Q8IZ57 195 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 SGF29Q96ES7 293 aa17.51■□□□□ 0.39
HERC2-208ENST00000566635 TRMT6Q9UJA5 497 aaKnown RBP17.51■□□□□ 0.39
HERC2-208ENST00000566635 PIKFYVEQ9Y2I7 2098 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 IGLV3-16A0A075B6K0 115 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 H3BMM5 538 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 K7ESM1 405 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 PYGLP06737 847 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 FGF3P11487 239 aaPredicted RBP17.5■□□□□ 0.39
HERC2-208ENST00000566635 CPA3P15088 417 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 CD1DP15813 335 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 NSG1P42857 185 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 AGAP9Q5VTM2 703 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 TMEM92Q6UXU6 159 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 Q6ZS52 159 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 DET1Q7L5Y6 550 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 CPLX4Q7Z7G2 160 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 PTERQ96BW5 349 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 TARM1B6A8C7 271 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 ZBTB14O43829 449 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 SOD1P00441 154 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 DNTTP04053 509 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 AKT1P31749 480 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 PUS10Q3MIT2 529 aaKnown RBP17.5■□□□□ 0.39
HERC2-208ENST00000566635 CGB2Q6NT52 195 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 CCDC91Q7Z6B0 441 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 CPNE9Q8IYJ1 553 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 GANCQ8TET4 914 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 CDH19Q9H159 772 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 FBXL12Q9NXK8 326 aa17.5■□□□□ 0.39
HERC2-208ENST00000566635 INPP4BO15327 924 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 APOA4P06727 396 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 MYL2P10916 166 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 TFEBP19484 476 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 CD9P21926 228 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 SLC26A3P40879 764 aa17.49■□□□□ 0.39
HERC2-208ENST00000566635 KPNA2P52292 529 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms