RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 UBAC1Q9BSL1 405 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 NUF2Q9BZD4 464 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 EDEM3Q9BZQ6 932 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MOV10Q9HCE1 1003 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 VPS18Q9P253 973 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MUTYHQ9UIF7 546 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 SAR1BQ9Y6B6 198 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PIAS3Q9Y6X2 628 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 PLXNA3P51805 1871 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MYO5AQ9Y4I1 1855 aaKnown RBP4.31□□□□□ -1.72
LINC00561-201ENST00000565815 MYH8P13535 1937 aa4.31□□□□□ -1.72
LINC00561-201ENST00000565815 BTBD18B2RXH4 712 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 EIF3CLB5ME19 914 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 MCIDASD6RGH6 385 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 H3BQF6 201 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 UGDHO60701 494 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 RTN3O95197 1032 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 FGFR1OPO95684 399 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 EPB41P11171 864 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 WT1P19544 449 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TGM2P21980 687 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GDF5P43026 501 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 CCR9P51686 369 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 INHBCP55103 352 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 DYNLL1P63167 89 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KARSQ15046 597 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TTC31Q49AM3 519 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TCP11X2Q5H9J9 407 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 C12orf60Q5U649 245 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 MMGT1Q8N4V1 131 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 OR52N4Q8NGI2 321 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 DHTKD1Q96HY7 919 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 RIOK1Q9BRS2 568 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 CRACR2AQ9BSW2 395 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PREBQ9HCU5 417 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SAMSN1Q9NSI8 373 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ZNHIT2Q9UHR6 403 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GGA2Q9UJY4 613 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 UTS2RQ9UKP6 389 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SCN10AQ9Y5Y9 1956 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 A6NNC1 897 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 HNRNPRO43390 633 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TNFSF14O43557 240 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 IDH1O75874 414 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 NUDT3O95989 172 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GH1P01241 217 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TCP1P17987 556 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 CASP14P31944 242 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KRT9P35527 623 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PRPHP41219 470 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 DPTQ07507 201 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF268Q14587 947 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KRT31Q15323 416 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SLC18A3Q16572 532 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PFKFB3Q16875 520 aaPredicted RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 SYTL3Q4VX76 610 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 EMBQ6PCB8 327 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GPSM1Q86YR5 675 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ENDOVQ8N8Q3 282 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TRIM58Q8NG06 486 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 RASSF8Q8NHQ8 419 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 RSPH1Q8WYR4 309 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TOP1MTQ969P6 601 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 AK8Q96MA6 479 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PPP1R10Q96QC0 940 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 LZTFL1Q9NQ48 299 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PIH1D3Q9NQM4 214 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 RNF146Q9NTX7 359 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 BLOC1S4Q9NUP1 217 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 HSPB7Q9UBY9 170 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 MKLN1Q9UL63 735 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ATP8B3O60423 1300 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KCNJ18B7U540 433 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 F5H6K3 240 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 PSMA7O14818 248 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ORC4O43929 436 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 NFATC1O95644 943 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 AKR1B1P15121 316 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GSTM2P28161 218 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 HNRNPH3P31942 346 aaKnown RBP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KIF5BP33176 963 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TDO2P48775 406 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 GNAQP50148 359 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ADPRHP54922 357 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 VSNL1P62760 191 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ZBED6P86452 979 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 KLRC3Q07444 240 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 NONOQ15233 471 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TBRG1Q3YBR2 411 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ISM2Q6H9L7 571 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 TMEM184AQ6ZMB5 413 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 B4GALNT4Q76KP1 1039 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
LINC00561-201ENST00000565815 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms