RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CFAP157Q5JU67 520 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 GIMAP7Q8NHV1 300 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 INPP5DQ92835 1189 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 CNDP1Q96KN2 507 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 HAO1Q9UJM8 370 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 IGLV3-16A0A075B6K0 115 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 NEMP2A6NFY4 417 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 IQCF5A8MTL0 148 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 H0Y858 1186 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 NPC1O15118 1278 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 KERAO60938 352 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 TSPAN12O95859 305 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 EPHX1P07099 455 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 ELFN1P0C7U0 828 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 HNRNPLP14866 589 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLN6-205ENST00000564846 ALOX15P16050 662 aaPredicted RBP19.37■□□□□ 0.69
CLN6-205ENST00000564846 KCNC1P48547 511 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 PRKAA1Q13131 559 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 OR4D1Q15615 310 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 ARL13AQ5H913 290 aaPredicted RBP19.37■□□□□ 0.69
CLN6-205ENST00000564846 SPDYAQ5MJ70 313 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 EGFLAMQ63HQ2 1017 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 FBXL19Q6PCT2 694 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 Q6ZVL8 140 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 TRAM1L1Q8N609 369 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 CLDN19Q8N6F1 224 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 CSGALNACT1Q8TDX6 532 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 ARRDC3Q96B67 414 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 PDLIM5Q96HC4 596 aaKnown RBP19.37■□□□□ 0.69
CLN6-205ENST00000564846 ATOH8Q96SQ7 321 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 SPATA16Q9BXB7 569 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 ACTR5Q9H9F9 607 aaPredicted RBP19.37■□□□□ 0.69
CLN6-205ENST00000564846 SARS2Q9NP81 518 aaKnown RBP19.37■□□□□ 0.69
CLN6-205ENST00000564846 PNPOQ9NVS9 261 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 HEY2Q9UBP5 337 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 CD207Q9UJ71 328 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 HCN2Q9UL51 889 aa19.37■□□□□ 0.69
CLN6-205ENST00000564846 SYCE1LA8MT33 242 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 C1QTNF3-AMACRE9PGA6 284 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 UBOX5O94941 541 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 KCNA5P22460 613 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 LIPIQ6XZB0 460 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 TECPR1Q7Z6L1 1165 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CPNE9Q8IYJ1 553 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 NRSN1Q8IZ57 195 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CCNYL1Q8N7R7 359 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 ZNF781Q8N8C0 355 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 ERP27Q96DN0 273 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CCDC97Q96F63 343 aaPredicted RBP19.36■□□□□ 0.69
CLN6-205ENST00000564846 LINGO1Q96FE5 620 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 TMEM237Q96Q45 408 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 ZSCAN5AQ9BUG6 496 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CYP4F12Q9HCS2 524 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 PRSS16Q9NQE7 514 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 DYRK4Q9NR20 520 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CD84Q9UIB8 345 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.36■□□□□ 0.69
CLN6-205ENST00000564846 PRSS21Q9Y6M0 314 aa19.36■□□□□ 0.69
CLN6-205ENST00000564846 CHRNGP07510 517 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 IMPDH1P20839 514 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 IGFBP4P22692 258 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 ETV3P41162 512 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 TNFRSF4P43489 277 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 ENPP2Q13822 863 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 CRY1Q16526 586 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 HENMT1Q5T8I9 393 aaKnown RBP19.35■□□□□ 0.69
CLN6-205ENST00000564846 EEF1AKMT1Q8WVE0 214 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 L3HYPDHQ96EM0 354 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 PANX3Q96QZ0 392 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 P2RY13Q9BPV8 354 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 MYLK2Q9H1R3 596 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 CACNA2D2Q9NY47 1150 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 RNF112Q9ULX5 631 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 SLC12A4Q9UP95 1085 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 STON1Q9Y6Q2 735 aa19.35■□□□□ 0.69
CLN6-205ENST00000564846 ANKRD65E5RJM6 399 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 BTN3A1O00481 513 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 HGSO14964 777 aaPredicted RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 SLC25A14O95258 325 aaPredicted RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 ADRB3P13945 408 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 RPL14P50914 215 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 GALK1P51570 392 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 CORO7P57737 925 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 ZBTB16Q05516 673 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 ZNF284Q2VY69 593 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 HSF5Q4G112 596 aaPredicted RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 GPRC6AQ5T6X5 926 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 FAM46CQ5VWP2 391 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 RAB44Q7Z6P3 723 aaPredicted RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 MTDHQ86UE4 582 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 SCAMP4Q969E2 229 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 SKA1Q96BD8 255 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 PHF21BQ96EK2 531 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 ACOX2Q99424 681 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 TRMOQ9BU70 441 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 FBRSL1Q9HCM7 1045 aaKnown RBP19.34■□□□□ 0.69
CLN6-205ENST00000564846 DNAJC28Q9NX36 388 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 KLHL42Q9P2K6 505 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 REV3LO60673 3130 aa19.34■□□□□ 0.69
CLN6-205ENST00000564846 SLCO1B7G3V0H7 640 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms