RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF765Q7L2R6 523 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 PARS2Q7L3T8 475 aaKnown RBP15.41■□□□□ 0.06
COMMD4-210ENST00000564587 CYP2U1Q7Z449 544 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 NLRP8Q86W28 1048 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 SPATA6LQ8N4H0 392 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 AFAP1L2Q8N4X5 818 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 PNPLA1Q8N8W4 532 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 RFWD2Q8NHY2 731 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 CD200R1Q8TD46 325 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 STON2Q8WXE9 905 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 DCUN1D1Q96GG9 259 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 FAM129BQ96TA1 746 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 SORT1Q99523 831 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 P2RY13Q9BPV8 354 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 TUBB6Q9BUF5 446 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 SPATA16Q9BXB7 569 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 TMEM120AQ9BXJ8 343 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 HDAC8Q9BY41 377 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 MTG2Q9H4K7 406 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 ALG9Q9H6U8 611 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 FBRSQ9HAH7 460 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 VTI1BQ9UEU0 232 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 DCTN4Q9UJW0 460 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 APOBEC2Q9Y235 224 aaKnown RBP15.41■□□□□ 0.06
COMMD4-210ENST00000564587 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
COMMD4-210ENST00000564587 KPNA5O15131 536 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ITM2AO43736 263 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ZBTB14O43829 449 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 EPHX1P07099 455 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 CBSLP0DN79 551 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 HLA-EP13747 358 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ALOX15P16050 662 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 UGT1A6P19224 532 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 IMPDH1P20839 514 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 UGT1A1P22309 533 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 UGT1A4P22310 534 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 UGT1A3P35503 534 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 UGT1A5P35504 534 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 CBSP35520 551 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 IL12RB1P42701 662 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 CLCN7P51798 805 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 PGGT1BP53609 377 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 NAGLUP54802 743 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ZBTB16Q05516 673 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 MESP2Q0VG99 397 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 SF3A3Q12874 501 aaKnown RBP eCLIP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 TMEM52BQ4KMG9 183 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ATP13A5Q4VNC0 1218 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 SETMARQ53H47 684 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 LDLRAP1Q5SW96 308 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 CES4AQ5XG92 561 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 LIPIQ6XZB0 460 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ERN2Q76MJ5 926 aaKnown RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 TECPR1Q7Z6L1 1165 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 L3HYPDHQ96EM0 354 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 FAR2Q96K12 515 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 VPS35Q96QK1 796 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 C8orf33Q9H7E9 229 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 KCNK13Q9HB14 408 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 PRSS16Q9NQE7 514 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 SPATS2LQ9NUQ6 558 aaKnown RBP15.4■□□□□ 0.06
COMMD4-210ENST00000564587 DNAJC28Q9NX36 388 aa15.4■□□□□ 0.06
COMMD4-210ENST00000564587 A8MT66 165 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 WNT9AO14904 365 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 AREL1O15033 823 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 CCDC22O60826 627 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 IGFBP4P22692 258 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 GALK1P51570 392 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 ACOX1Q15067 660 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 HENMT1Q5T8I9 393 aaKnown RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 SDE2Q6IQ49 451 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 TXNDC11Q6PKC3 985 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 NAPRTQ6XQN6 538 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 TRMT11Q7Z4G4 463 aaKnown RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 HSD11B1LQ7Z5J1 315 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 ADAMTSL2Q86TH1 951 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 SIDT2Q8NBJ9 832 aaKnown RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 ARRDC3Q96B67 414 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 LINGO1Q96FE5 620 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 THOC1Q96FV9 657 aaKnown RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 RMDN2Q96LZ7 410 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 ATOH8Q96SQ7 321 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 RPP25Q9BUL9 199 aaKnown RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 C20orf27Q9GZN8 174 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-210ENST00000564587 SARDHQ9UL12 918 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 SORCS3Q9UPU3 1222 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 STON1Q9Y6Q2 735 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
COMMD4-210ENST00000564587 STX16-NPEPL1H3BU86 382 aa15.38■□□□□ 0.05
COMMD4-210ENST00000564587 STX16O14662 325 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms