RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 OXA1LQ15070 435 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 USP41Q3LFD5 358 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 DDI2Q5TDH0 399 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 GPR107Q5VW38 600 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 CYB5R2Q6BCY4 276 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 RPL13AP3Q6NVV1 102 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ASRGL1Q7L266 308 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 SH3RF1Q7Z6J0 888 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM172AQ8WUF8 416 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 WNT8BQ93098 351 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 BSCL2Q96G97 398 aaPredicted RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF641Q96N77 438 aaPredicted RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 CYP2S1Q96SQ9 504 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 BTBD10Q9BSF8 475 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 THUMPD3Q9BV44 507 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 OSBPL8Q9BZF1 889 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZFP57Q9NU63 452 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM198AQ9UFP1 575 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM208AQ9UK61 1670 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CCDC154A6NI56 674 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 SIGLEC16A6NMB1 481 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 MARCH11A6NNE9 402 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L5A8MUK1 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L15C9J2P7 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L12C9JPN9 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L11C9JVI0 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L21D6R901 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L18D6R9N7 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L22D6RA61 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L19D6RCP7 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L20D6RJB6 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 H3BMM5 538 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 H7C1D1 291 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 MED6O75586 246 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PLA2G4BP0C869 781 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 IL1R1P14778 569 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 FOSL2P15408 326 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 UQCRC1P31930 480 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 DPP6P42658 865 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 GRIA4P48058 902 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 KPNA2P52292 529 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 YWHAGP61981 247 aaKnown RBP eCLIP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ERVK-25P63136 954 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 LRRC63Q05C16 580 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP17L24Q0WX57 530 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 TEFQ10587 303 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PRKAA1Q13131 559 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 AUHQ13825 339 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CAMK1Q14012 370 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PUM1Q14671 1186 aaKnown RBP eCLIP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PCGF3Q3KNV8 242 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ZNF311Q5JNZ3 666 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 HAUS6Q7Z4H7 955 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 THAP5Q7Z6K1 395 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 SLC13A5Q86YT5 568 aaPredicted RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PAPD5Q8NDF8 572 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 OR2L8Q8NGY9 312 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CD300LFQ8TDQ1 290 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 NR4A3Q92570 626 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ERVK-6Q9BXR3 956 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 WWP1Q9H0M0 922 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CPNE5Q9HCH3 593 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ABCB10Q9NRK6 738 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ERVK-18Q9QC07 812 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 SORCS3Q9UPU3 1222 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CA5BQ9Y2D0 317 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 STXBP5LQ9Y2K9 1186 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ACOT9Q9Y305 439 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 OVOS2A0A0G2JMS6 1433 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 OVOS2A0A0J9YW53 1432 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 OVOS2Q6IE36 1432 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 USP54Q70EL1 1684 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CCDC182A6NF36 153 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CDC7O00311 574 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 TLL1O43897 1013 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 JAK2O60674 1132 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 VNN1O95497 513 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PRF1P14222 555 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CDH2P19022 906 aaPredicted RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PCSK1P29120 753 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 TIE1P35590 1138 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 MAGEA6P43360 314 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 NSFP46459 744 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 EN1Q05925 392 aaPredicted RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 GRIN2CQ14957 1233 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ATAT1Q5SQI0 421 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 HEPHL1Q6MZM0 1159 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 UGT3A1Q6NUS8 523 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 KCNT2Q6UVM3 1135 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 SPATC1Q76KD6 591 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ANKRD46Q86W74 232 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 MREGQ8N565 214 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 PDPRQ8NCN5 879 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 BPIFCQ8NFQ6 507 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 NTAN1Q96AB6 310 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CAMKK2Q96RR4 588 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 ELP3Q9H9T3 547 aa5.9□□□□□ -1.47
TUBGCP4-207ENST00000563963 CYP3A43Q9HB55 503 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms