RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 TBR1Q16650 682 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 ARMC12Q5T9G4 340 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 HIST2H2BCQ6DN03 193 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 ZCCHC8Q6NZY4 707 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 BRAT1Q6PJG6 821 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 USP53Q70EK8 1073 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 TRMT10CQ7L0Y3 403 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 NLRP9Q7RTR0 991 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 VASH2Q86V25 355 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 SLC35F3Q8IY50 421 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 RBFAQ8N0V3 343 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 RYBPQ8N488 228 aaPredicted RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 ARL14Q8N4G2 192 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 DNAAF3Q8N9W5 541 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 IPMKQ8NFU5 416 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 OR2A12Q8NGT7 310 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 WDR36Q8NI36 951 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 LMX1AQ8TE12 382 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 AENQ8WTP8 325 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 PEX13Q92968 403 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 SGF29Q96ES7 293 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 OXNAD1Q96HP4 312 aaPredicted RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 SERPINB12Q96P63 405 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 TDRD1Q9BXT4 1180 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 IL22Q9GZX6 179 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 TRABDQ9H4I3 376 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 ARFGAP3Q9NP61 516 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 HACD3Q9P035 362 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 DKK3Q9UBP4 350 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 PHTF1Q9UMS5 762 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
RPAP1-205ENST00000563293 SPTBN1Q01082 2364 aaKnown RBP9.41□□□□□ -0.9
RPAP1-205ENST00000563293 CSMD1Q96PZ7 3565 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 SPTY2D1-AS1A0A0U1RR47 76 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 AQP9O43315 295 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PMPCBO75439 489 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 TMEM63AO94886 807 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PCDH8O95206 1070 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 TTC4O95801 387 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 MT-CYBP00156 380 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CELA2BP08218 269 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ITGA2BP08514 1039 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 H2AFXP16104 143 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 UGT1A5P35504 534 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CCNHP51946 323 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 HNRNPKP61978 463 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 NR0B2Q15466 257 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 TRADDQ15628 312 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 SLC1A5Q15758 541 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CCDC38Q502W7 563 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ARSIQ5FYB1 569 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CFAP58Q5T655 872 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 FAXCQ5TGI0 409 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ZNF449Q6P9G9 518 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 DPY19L3Q6ZPD9 716 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CYS1Q717R9 158 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CAND1Q86VP6 1230 aaKnown RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 RAVER1Q8IY67 606 aaKnown RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 MREGQ8N565 214 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 SPATA22Q8NHS9 363 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PYROXD1Q8WU10 500 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ECHDC3Q96DC8 303 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PPP1R16AQ96I34 528 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 RANBP9Q96S59 729 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CCDC3Q9BQI4 270 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 GORASP1Q9BQQ3 440 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 BOCQ9BWV1 1114 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 SLC17A9Q9BYT1 436 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 TM6SF2Q9BZW4 377 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
RPAP1-205ENST00000563293 SAMD15Q9P1V8 674 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 IL36AQ9UHA7 158 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 RIMKLBQ9ULI2 386 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 PPIL1Q9Y3C6 166 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 ACTL7AQ9Y615 435 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 HS3ST3A1Q9Y663 406 aa9.4□□□□□ -0.9
RPAP1-205ENST00000563293 CENPEQ02224 2701 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 CREBBPQ92793 2442 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 CCDC187A0A096LP49 1063 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 TCRBV7S3A2A0A539 114 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 TSPAN11A1L157 253 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 HEATR9A2RTY3 570 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 CLEC18AA5D8T8 446 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 A6NNZ2 444 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 ANKRD66B4E2M5 251 aa9.39□□□□□ -0.91
RPAP1-205ENST00000563293 NTN3O00634 580 aaPredicted RBP9.39□□□□□ -0.91
RPAP1-205ENST00000563293 TRAFD1O14545 582 aaPredicted RBP9.39□□□□□ -0.91
RPAP1-205ENST00000563293 FZD6O60353 706 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms