RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 GOLGA8DPQ0D2H9 430 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 CCDC153Q494R4 210 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
SMG1-207ENST00000563235 PHYHD1Q5SRE7 291 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 PRAMEF8Q5VWM4 474 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 SIGIRRQ6IA17 410 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 TPGS1Q6ZTW0 290 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 PAGE2Q7Z2X7 111 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 RTN4RL2Q86UN3 420 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 CCDC36Q8IYA8 594 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 BATF2Q8N1L9 274 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 MEIOBQ8N635 442 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 TMIEQ8NEW7 156 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 EXD1Q8NHP7 514 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 FANK1Q8TC84 345 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 DYDC1Q8WWB3 177 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 RAD51AP1Q96B01 352 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 NSUN5Q96P11 429 aaKnown RBP4.75□□□□□ -1.65
SMG1-207ENST00000563235 SLC25A23Q9BV35 468 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 TDRD3Q9H7E2 651 aaKnown RBP4.75□□□□□ -1.65
SMG1-207ENST00000563235 FSCN3Q9NQT6 498 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 COPG2Q9UBF2 871 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 USP21Q9UK80 565 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 SCML1Q9UN30 329 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 CASKIN1Q8WXD9 1431 aa4.75□□□□□ -1.65
SMG1-207ENST00000563235 FAM230AA0A1W2PPH8 454 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 WDR91A4D1P6 747 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 H0YJX3 145 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 K7EQM0 130 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 BTN3A1O00481 513 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 HS3ST1O14792 307 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DFNA5O60443 496 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PDE5AO76074 875 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 KRT8P05787 483 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CELA3BP08861 270 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TNNI3P19429 210 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ITIH1P19827 911 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SERPINA4P29622 427 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ALDH3B1P43353 468 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ARSFP54793 590 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 MTTPP55157 894 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 NLRP11P59045 1033 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 YWHAEP62258 255 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 GPLD1P80108 840 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PPP3CAQ08209 521 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SIGLEC14Q08ET2 396 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DMP1Q13316 513 aaPredicted RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 CTBP1Q13363 440 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DRP2Q13474 957 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 STILQ15468 1287 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DECR1Q16698 335 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 NAA35Q5VZE5 725 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 LRRC66Q68CR7 880 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CLEC9AQ6UXN8 241 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 C15orf39Q6ZRI6 1047 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ZDHHC14Q8IZN3 488 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 RASGEF1AQ8N9B8 481 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TC2NQ8N9U0 490 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CLEC1AQ8NC01 280 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 C11orf65Q8NCR3 313 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 REXO5Q96IC2 774 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 METTL2AQ96IZ6 378 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 MAP6Q96JE9 813 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ZNF607Q96SK3 696 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SLC29A1Q99808 456 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SPATA16Q9BXB7 569 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 GPR27Q9NS67 375 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PNPLA3Q9NST1 481 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PRMT7Q9NVM4 692 aaPredicted RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 TRNAU1APQ9NX07 287 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 KCMF1Q9P0J7 381 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 MGAT4CQ9UBM8 478 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 FBXL17Q9UF56 701 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ATXN7L1Q9ULK2 861 aaPredicted RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 NIP7Q9Y221 180 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMG1-207ENST00000563235 NUMBLQ9Y6R0 609 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TET3O43151 1660 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 EHBP1L1Q8N3D4 1523 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 USP47Q96K76 1375 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SHANK3Q9BYB0 1731 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TNS1Q9HBL0 1735 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 CHD2O14647 1828 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 A0A0A6YYJ9 748 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 EDDM13A0A1B0GTR0 161 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ARHGEF35A5YM69 484 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 KCNJ18B7U540 433 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PRR23D1E9PI22 279 aaPredicted RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 SLCO1B7G3V0H7 640 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 HAS3O00219 553 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PIK3R2O00459 728 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CES2O00748 559 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SSX5O60225 188 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 MBD3O95983 291 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 POMCP01189 267 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 GSTP1P09211 210 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 STAG3L2P0CL84 134 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PRR23D2P0DMB1 279 aaPredicted RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 RARAP10276 462 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms