RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ZDHHC3Q9NYG2 299 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 TRMT6Q9UJA5 497 aaKnown RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 E5RI56 91 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 AREL1O15033 823 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 TSPAN12O95859 305 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 KITP10721 976 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 ADRB3P13945 408 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 ATP5F1P24539 256 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-208ENST00000563220 TIE1P35590 1138 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 SKIV2L2P42285 1042 aaKnown RBP17.87■□□□□ 0.45
COMMD4-208ENST00000563220 NAGLUP54802 743 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 B4GALNT1Q00973 533 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-208ENST00000563220 WRAP53Q9BUR4 548 aaKnown RBP17.87■□□□□ 0.45
COMMD4-208ENST00000563220 DERL2Q9GZP9 239 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 MARCOQ9UEW3 520 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-208ENST00000563220 LIMD1Q9UGP4 676 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 DHRS7Q9Y394 339 aa17.87■□□□□ 0.45
COMMD4-208ENST00000563220 CCT8L1PA6NM43 557 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 SPECC1L-ADORA2AF8WAN1 911 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 MBTPS2O43462 519 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ELFN1P0C7U0 828 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ITGB6P18564 788 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 CTHP32929 405 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 PSMD8P48556 350 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 LIG3P49916 1009 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 DCDC1P59894 354 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 OR4D1Q15615 310 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 HSF5Q4G112 596 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 HENMT1Q5T8I9 393 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 SLC44A3Q8N4M1 653 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 NKAPQ8N5F7 415 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 EEF1AKMT1Q8WVE0 214 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 SREK1Q8WXA9 508 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 PPP1R16AQ96I34 528 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 COPS8Q99627 209 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 RIOK2Q9BVS4 552 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 TFB2MQ9H5Q4 396 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 GNPTGQ9UJJ9 305 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 DNAJC16Q9Y2G8 782 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 A0A0G2JND7 137 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 CCR10P46092 362 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 PRKAA2P54646 552 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 MACC1Q6ZN28 852 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ERN2Q76MJ5 926 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 DSG4Q86SJ6 1040 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 PACS2Q86VP3 889 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 SUGP1Q8IWZ8 645 aaKnown RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 CPNE9Q8IYJ1 553 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 DTX3LQ8TDB6 740 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ULK4Q96C45 1275 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ABCF3Q9NUQ8 709 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 PNPOQ9NVS9 261 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 MBD1Q9UIS9 605 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-208ENST00000563220 USH1CQ9Y6N9 552 aa17.86■□□□□ 0.45
COMMD4-208ENST00000563220 ZNF106Q9H2Y7 1883 aaKnown RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 IGLV3-16A0A075B6K0 115 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 RGSL1A5PLK6 1076 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 A8MT66 165 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 TMEM114B3SHH9 223 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 C1QTNF3-AMACRE9PGA6 284 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 H2AFYO75367 372 aaKnown RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 SLC25A14O95258 325 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 NSG1P42857 185 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 DNAJB13P59910 316 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 CAMK2GQ13555 558 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 ACOX1Q15067 660 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 GPRC6AQ5T6X5 926 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 IER5LQ5T953 404 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 UGT3A1Q6NUS8 523 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 TRPM8Q7Z2W7 1104 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 TRAM1L1Q8N609 369 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 RHEBL1Q8TAI7 183 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 CCT6BQ92526 530 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 KIAA1191Q96A73 305 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 COQ10AQ96MF6 247 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 ATOH8Q96SQ7 321 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 UBE2ZQ9H832 354 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 CYP4F12Q9HCS2 524 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 DYRK4Q9NR20 520 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 HEBP1Q9NRV9 189 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 RAD18Q9NS91 495 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 NFKBIL1Q9UBC1 381 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-208ENST00000563220 COQ6Q9Y2Z9 468 aa17.85■□□□□ 0.45
COMMD4-208ENST00000563220 FADS2P1A8MWK0 482 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 H0Y858 1186 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PSMD11O00231 422 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 CDC7O00311 574 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TRIM16O95361 564 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 EGFP01133 1207 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 P2RY2P41231 377 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 IL2P60568 153 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 ATP6V0D1P61421 351 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 ELP6Q0PNE2 266 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 CNTN1Q12860 1018 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 SMAD4Q13485 552 aaKnown RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 C2orf27AQ580R0 203 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TRIM67Q6ZTA4 783 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PHF21BQ96EK2 531 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms