RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ZNF208O43345 1280 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 GAD2Q05329 585 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
RPAP1-204ENST00000562303 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
RPAP1-204ENST00000562303 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPAP1-204ENST00000562303 MED27Q6P2C8 311 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 B3GNT6Q6ZMB0 384 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 PRR23BQ6ZRT6 265 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 C1GALT1C1Q96EU7 318 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 GPR20Q99678 358 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 PTPN18Q99952 460 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 CCNB1IP1Q9NPC3 277 aa11.18□□□□□ -0.62
RPAP1-204ENST00000562303 A0A0X1KG70 313 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 RIIAD1A6NNX1 92 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ZBTB11O95625 1053 aaPredicted RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CYB5AP00167 134 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CFIP05156 583 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 GNALP38405 381 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 KIR3DL1P43629 444 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 MAPK12P53778 367 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PERM1Q5SV97 790 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SLC9A9Q8IVB4 645 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 JOSD2Q8TAC2 188 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ART4Q93070 314 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TP53INP1Q96A56 240 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SRMSQ9H3Y6 488 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 RHOJQ9H4E5 214 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 U3KQV3 271 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 A0A0J9YYE9 177 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 BTBD19C9JJ37 291 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 BTN3A3O00478 584 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 STK16O75716 305 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CLDN9O95484 217 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 NDST3O95803 873 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SERPINA6P08185 405 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 RHOQP17081 205 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ADRA1BP35368 520 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 RTP1P59025 263 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TAS2R50P59544 299 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 NDRG1Q92597 394 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PWWP2AQ96N64 755 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 HEPHQ9BQS7 1158 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 C15orf41Q9Y2V0 281 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CEP170BQ9Y4F5 1589 aaPredicted RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SEPT4O43236 478 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 UBXN7O94888 489 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 POP4O95707 220 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ANXA4P09525 319 aaPredicted RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 DGKGP49619 791 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 USP4Q13107 963 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 GRIK5Q16478 980 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SULT1C3Q6IMI6 304 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CXorf57Q6NSI4 855 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TRMT13Q9NUP7 481 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PNPOQ9NVS9 261 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 MIOSQ9NXC5 875 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 A0A1W2PQ72 361 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 A0A1W2PRG6 482 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PRAMEF1O95521 474 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CCKBRP32239 447 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CDH4P55283 916 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SLC13A2Q13183 592 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PDK3Q15120 406 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 VPS26BQ4G0F5 336 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 FRRS1Q6ZNA5 592 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CERS5Q8N5B7 392 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CAPNS2Q96L46 248 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 NPAS2Q99743 824 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 S100A9P06702 114 aaKnown RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ITGB5P18084 799 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 PDHA2P29803 388 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ABATP80404 500 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
RPAP1-204ENST00000562303 SUN3Q8TAQ9 357 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 CAPSLQ8WWF8 208 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 KAT2AQ92830 837 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 GPR21Q99679 349 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 DNAJC5Q9H3Z4 198 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 ACSS3Q9H6R3 686 aa11.17□□□□□ -0.62
RPAP1-204ENST00000562303 TCRBV9S1A1TA0A576 114 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 PLIN3O60664 434 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ALDH3A2P51648 485 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 AMZ1Q400G9 498 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 FBXL16Q8N461 479 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 TRMOQ9BU70 441 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms