RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TGIF1Q15583 401 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF569Q5MCW4 686 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 BROXQ5VW32 411 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ITPRIPL1Q6GPH6 555 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 CHST15Q7LFX5 561 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ZC3H18Q86VM9 953 aaKnown RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 JAMLQ86YT9 394 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 TMEM139Q8IV31 216 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 CDKL3Q8IVW4 592 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF567Q8N184 647 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 CCDC74BQ96LY2 380 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 GORASP1Q9BQQ3 440 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 KLHL8Q9P2G9 620 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 FAM153AQ9UHL3 310 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 TMPRSS11EQ9UL52 423 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 C9orf172C9J069 976 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 NUAK1O60285 661 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 MTX2O75431 263 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 ANXA9O76027 345 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 CCDC175P0C221 793 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 CCL4P13236 92 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 GPR3P46089 330 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 ARSDP51689 593 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 UCNP55089 124 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 WNT3AP56704 352 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 PRPSAP1Q14558 356 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.78■□□□□ 0.12
LMX1B-204ENST00000561065 ADGRG6Q86SQ4 1221 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 PIM3Q86V86 326 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 TTC30BQ8N4P2 665 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 TRAM1L1Q8N609 369 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 LRRC57Q8N9N7 239 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 SNRNP27Q8WVK2 155 aaKnown RBP15.78■□□□□ 0.12
LMX1B-204ENST00000561065 MRGPRX2Q96LB1 330 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 ALS2CR12Q96Q35 445 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 SPATA16Q9BXB7 569 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 OR2AG1Q9H205 316 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 CARD9Q9H257 536 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
LMX1B-204ENST00000561065 LOC285095A0A1B0GVY8 99 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GRID2IPA4D2P6 1211 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GPR39O43194 453 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 ZW10O43264 779 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 EFSO43281 561 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 THRAP10827 490 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 MPSTP25325 297 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 VAC14Q08AM6 782 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 PLA2G4EQ3MJ16 856 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 ZDHHC20Q5W0Z9 365 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 DARS2Q6PI48 645 aaKnown RBP15.77■□□□□ 0.12
LMX1B-204ENST00000561065 CRTC3Q6UUV7 619 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GLYATL1Q969I3 302 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 CMKLR1Q99788 373 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 DESI2Q9BSY9 194 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 ZSCAN5AQ9BUG6 496 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GPR63Q9BZJ6 419 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 TRABDQ9H4I3 376 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 RMI1Q9H9A7 625 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 BPIFA1Q9NP55 256 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 KCNK4Q9NYG8 393 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GUCA1BQ9UMX6 200 aa15.77■□□□□ 0.12
LMX1B-204ENST00000561065 AAR2Q9Y312 384 aaKnown RBP15.77■□□□□ 0.12
LMX1B-204ENST00000561065 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 PRR19A6NJB7 356 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 K7ENP7 123 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 NVLO15381 856 aaKnown RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 GRID2O43424 1007 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 CA5AP35218 305 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 LIMK2P53671 638 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 MAPK10P53779 464 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 EIF3EP60228 445 aaKnown RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 HHEXQ03014 270 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 MPP3Q13368 585 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 BIRC2Q13490 618 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 CLPPQ16740 277 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 SIRPB2Q5JXA9 342 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 AADACL2Q6P093 401 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 INO80CQ6PI98 192 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF547Q8IVP9 402 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 LRRC8AQ8IWT6 810 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 TTC9Q92623 222 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 USP7Q93009 1102 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 TMEM159Q96B96 161 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 CCDC97Q96F63 343 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 FCRL5Q96RD9 977 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 HACD3Q9P035 362 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 SCHIP1Q9P0W5 487 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 SLC23A2Q9UGH3 650 aa15.76■□□□□ 0.11
LMX1B-204ENST00000561065 GCN1Q92616 2671 aaKnown RBP15.76■□□□□ 0.11
LMX1B-204ENST00000561065 A0A0U1RQJ8 604 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 HGSO14964 777 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-204ENST00000561065 CHUKO15111 745 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 SLC25A14O95258 325 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-204ENST00000561065 RBP3P10745 1247 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 F3P13726 295 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 RBL1P28749 1068 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms