RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TAAR9Q96RI9 348 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 LYSMD1Q96S90 227 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 DDA1Q9BW61 102 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
SMAD3-214ENST00000560402 RAB17Q9H0T7 212 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 VPS18Q9P253 973 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 HEMK1Q9Y5R4 338 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-214ENST00000560402 BSNQ9UPA5 3926 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 MYO18BQ8IUG5 2567 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 IGHV1OR21-1A0A087WYE8 117 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 DUX1O43812 170 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-214ENST00000560402 PDHA1P08559 390 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 THRAP10827 490 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 SLC2A4P14672 509 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 MX2P20592 715 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 IL4RP24394 825 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 CCNCP24863 283 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 CD1CP29017 333 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 CSTF2P33240 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMAD3-214ENST00000560402 SSR1P43307 286 aaKnown RBP13.46□□□□□ -0.25
SMAD3-214ENST00000560402 ARSEP51690 589 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 DHX34Q14147 1143 aaKnown RBP13.46□□□□□ -0.25
SMAD3-214ENST00000560402 DPYSL3Q14195 570 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 PYCR3Q53H96 274 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 EMBQ6PCB8 327 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 KRT222Q8N1A0 295 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 PATE1Q8WXA2 126 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 ZMYND15Q9H091 742 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 KCNK4Q9NYG8 393 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 CD84Q9UIB8 345 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 ST14Q9Y5Y6 855 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 SPTA1P02549 2419 aa13.46□□□□□ -0.25
SMAD3-214ENST00000560402 FAM187AA6NFU0 413 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 B4E171 279 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 SLC28A2O43868 658 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 ZRANB2O95218 330 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 CSF2RBP32927 897 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 TSPAN7P41732 249 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 POLD2P49005 469 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 DSC2Q02487 901 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 PTSQ03393 145 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 MMRN1Q13201 1228 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 CUL1Q13616 776 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 LINC00303Q3SY05 128 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 VASH2Q86V25 355 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 SFRP1Q8N474 314 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 RCBTB1Q8NDN9 531 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 OR10G6Q8NH81 332 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 SLC37A2Q8TED4 501 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 EXTL1Q92935 676 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 SCAMP4Q969E2 229 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 RBM41Q96IZ5 413 aaKnown RBP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 TEFMQ96QE5 360 aaKnown RBP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 FAM117AQ9C073 453 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
SMAD3-214ENST00000560402 TTLL3Q9Y4R7 772 aa13.45□□□□□ -0.26
SMAD3-214ENST00000560402 BOD1L1Q8NFC6 3051 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 TLN1Q9Y490 2541 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 PPM1DO15297 605 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 PHF2O75151 1096 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 ASMTLO95671 621 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 KRT7P08729 469 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 CD48P09326 243 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 CCL4P13236 92 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 EPHA4P54764 986 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 SRSF6Q13247 344 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 HSP90B2PQ58FF3 399 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 ZFYVE27Q5T4F4 411 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 HENMT1Q5T8I9 393 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 LRRC38Q5VT99 294 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 TRIM74Q86UV6 250 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 EXD3Q8N9H8 876 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 KCTD6Q8NC69 237 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 SH3KBP1Q96B97 665 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 AHCYL2Q96HN2 611 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 SLC38A3Q99624 504 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 RIOK2Q9BVS4 552 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 AP1M1Q9BXS5 423 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms