RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PBX1P40424 430 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
TPM1-220ENST00000559556 MAPK9P45984 424 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 DCDC1P59894 354 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 MC1RQ01726 317 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 GBE1Q04446 702 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 SLC10A2Q12908 348 aaPredicted RBP12.93□□□□□ -0.34
TPM1-220ENST00000559556 IQCB1Q15051 598 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 SKIDA1Q1XH10 827 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 ZNF569Q5MCW4 686 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 ALKBH5Q6P6C2 394 aaKnown RBP12.93□□□□□ -0.34
TPM1-220ENST00000559556 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 UNC5BQ8IZJ1 945 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 PQLC3Q8N755 202 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 CCHCR1Q8TD31 782 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 ZSCAN5AQ9BUG6 496 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 MLPHQ9BV36 600 aaPredicted RBP12.93□□□□□ -0.34
TPM1-220ENST00000559556 DTLQ9NZJ0 730 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 OGFRQ9NZT2 677 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 ATXN10Q9UBB4 475 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 NENFQ9UMX5 172 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 CLEC18AA5D8T8 446 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 PRR19A6NJB7 356 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 CHUKO15111 745 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 SNX2O60749 519 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 PROSCO94903 275 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 SERPINC1P01008 464 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 ZNF8P17098 575 aaPredicted RBP12.92□□□□□ -0.34
TPM1-220ENST00000559556 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
TPM1-220ENST00000559556 CD86P42081 329 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 GFERP55789 205 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 IFI35P80217 286 aaPredicted RBP12.92□□□□□ -0.34
TPM1-220ENST00000559556 FOXK1P85037 733 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 ZBED6P86452 979 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 PDPK2PQ6A1A2 396 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 CLEC18BQ6UXF7 455 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 KDELC2Q7Z4H8 507 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 CCDC13Q8IYE1 715 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 ESX1Q8N693 406 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 KCTD6Q8NC69 237 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 CLEC18CQ8NCF0 446 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 APOBEC4Q8WW27 367 aaKnown RBP12.92□□□□□ -0.34
TPM1-220ENST00000559556 EID2BQ96D98 161 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 PLEKHG4BQ96PX9 1271 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 TRIB3Q96RU7 358 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 ADGRE3Q9BY15 652 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 OR2AG1Q9H205 316 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 PRDM8Q9NQV8 689 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 KLHL3Q9UH77 587 aa12.92□□□□□ -0.34
TPM1-220ENST00000559556 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 KCNK1O00180 336 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TOX3O15405 576 aaPredicted RBP12.91□□□□□ -0.34
TPM1-220ENST00000559556 MTA2O94776 668 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 SLC25A14O95258 325 aaPredicted RBP12.91□□□□□ -0.34
TPM1-220ENST00000559556 KRT7P08729 469 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TCN2P20062 427 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TAS2R40P59535 323 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
TPM1-220ENST00000559556 ZBTB17Q13105 803 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 GALNT3Q14435 633 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 CNTD1Q8N815 330 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 CCNYQ8ND76 341 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 GPR26Q8NDV2 337 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 GLYATL1Q969I3 302 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 IQCDQ96DY2 449 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TIMM29Q9BSF4 260 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 SPATA16Q9BXB7 569 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 ULBP3Q9BZM4 244 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 OSGEPL1Q9H4B0 414 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
TPM1-220ENST00000559556 ZFYVE1Q9HBF4 777 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 TRIM39Q9HCM9 518 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 KLC4Q9NSK0 619 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 CAPN11Q9UMQ6 739 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 MRPS18BQ9Y676 258 aaKnown RBP12.91□□□□□ -0.34
TPM1-220ENST00000559556 RPS6KL1Q9Y6S9 549 aa12.91□□□□□ -0.34
TPM1-220ENST00000559556 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 KMOO15229 486 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 UBXN7O94888 489 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 JCHAINP01591 159 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 F8A1P23610 371 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 SLC19A1P41440 591 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 CAPZBP47756 277 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 INSCQ1MX18 579 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 ZNF648Q5T619 568 aaPredicted RBP12.9□□□□□ -0.34
TPM1-220ENST00000559556 ATP1A1-AS1Q5TC04 95 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 ADGRG6Q86SQ4 1221 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
TPM1-220ENST00000559556 TRAM1L1Q8N609 369 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms