RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CDK14O94921 469 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 NDUFA10O95299 355 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 EML2O95834 649 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 CD68P34810 354 aaPredicted RBP17.54■□□□□ 0.4
TPM1-218ENST00000559281 ETV5P41161 510 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 CETN2P41208 172 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 ADCY2Q08462 1091 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 MPP3Q13368 585 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 NFATC2Q13469 925 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 WDR74Q6RFH5 385 aaPredicted RBP17.54■□□□□ 0.4
TPM1-218ENST00000559281 BBS12Q6ZW61 710 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 ADGRG6Q86SQ4 1221 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 BRSK1Q8TDC3 778 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 TTC25Q96NG3 672 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 HEMGNQ9BXL5 484 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 OSGEPL1Q9H4B0 414 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 EPB41L1Q9H4G0 881 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 ARFGAP3Q9NP61 516 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 KLC4Q9NSK0 619 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TPM1-218ENST00000559281 PCYT1BQ9Y5K3 369 aaPredicted RBP17.54■□□□□ 0.4
TPM1-218ENST00000559281 ARHGEF17Q96PE2 2063 aaPredicted RBP17.53■□□□□ 0.4
TPM1-218ENST00000559281 C9orf172C9J069 976 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 H7C0C1 242 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 APOC4-APOC2K7ER74 178 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 CHUKO15111 745 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 APOC2P02655 101 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 THRAP10827 490 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 CCL4P13236 92 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 HLA-DPA1P20036 260 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ATP5OP48047 213 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ZNF75DP51815 510 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 EPHA4P54764 986 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 TGIF1Q15583 401 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 INSCQ1MX18 579 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 MANEAQ5SRI9 462 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 KDELC1Q6UW63 502 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 LRRTM4Q86VH4 590 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ZNF567Q8N184 647 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 DTX3LQ8TDB6 740 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.44e-9■■■■■ 47.8
TPM1-218ENST00000559281 VPS35Q96QK1 796 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 FSD1LQ9BXM9 530 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ASPSCR1Q9BZE9 553 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 BPIFA1Q9NP55 256 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 PRDM8Q9NQV8 689 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 PDP2Q9P2J9 529 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 CPNE7Q9UBL6 633 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 TFR2Q9UP52 801 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 PCDHGA3Q9Y5H0 932 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 PCDHA3Q9Y5H8 950 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 ADGRG1Q9Y653 693 aa17.53■□□□□ 0.4
TPM1-218ENST00000559281 BPTFQ12830 3046 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 A6NCN8 305 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 STMND1H3BQB6 276 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 AURKAO14965 403 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 PPFIA2O75334 1257 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 ANXA9O76027 345 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 PRB1P04280 392 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 FGF3P11487 239 aaPredicted RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 ZNF7P17097 686 aaPredicted RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 VCLP18206 1134 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 MPSTP25325 297 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 CTNNA2P26232 953 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 CSF2RBP32927 897 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 CTNNA1P35221 906 aaKnown RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 CFHR1Q03591 330 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 GTF2H3Q13889 308 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 SIRPB2Q5JXA9 342 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 ZNF648Q5T619 568 aaPredicted RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 ITPRIPL1Q6GPH6 555 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 CRTC3Q6UUV7 619 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 ZFAND4Q86XD8 727 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 ZNF761Q86XN6 746 aaPredicted RBP17.52■□□□□ 0.4
TPM1-218ENST00000559281 SLC25A41Q8N5S1 370 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 IPMKQ8NFU5 416 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 NCSTNQ92542 709 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 KRT35Q92764 455 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 MRGPRX2Q96LB1 330 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 TIMM29Q9BSF4 260 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 SLC39A1Q9NY26 324 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 PKP3Q9Y446 797 aa17.52■□□□□ 0.4
TPM1-218ENST00000559281 KIF26BQ2KJY2 2108 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 CCDC66A2RUB6 948 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 SOWAHDA6NJG2 315 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 BTNL10A8MVZ5 291 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 B4E171 279 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 KCNJ13O60928 360 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
TPM1-218ENST00000559281 STK10O94804 968 aaKnown RBP17.51■□□□□ 0.39
TPM1-218ENST00000559281 VIPP01282 170 aa17.51■□□□□ 0.39
TPM1-218ENST00000559281 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms