RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SPATA24Q86W54 205 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 OR52B6Q8NGF0 335 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 FAR2Q96K12 515 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 CEP295NLQ96MC4 621 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 KLHL32Q96NJ5 620 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SERPINI1Q99574 410 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 HGH1Q9BTY7 390 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 C1orf50Q9BV19 199 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 ASB8Q9H765 288 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 ABCB8Q9NUT2 735 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 DLGAP2Q9P1A6 1054 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SLC4A7Q9Y6M7 1214 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 DPPA5A6NC42 116 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 KATNA1O75449 491 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 SNRPB2P08579 225 aaKnown RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 LAG3P18627 525 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 HMGCLP35914 325 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SATB1Q01826 763 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SQLEQ14534 574 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 ANKS6Q68DC2 871 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 AAGABQ6PD74 315 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SYVN1Q86TM6 617 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 SERPINA9Q86WD7 417 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 ZNF513Q8N8E2 541 aaPredicted RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 KLHL23Q8NBE8 558 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 PLEKHG4BQ96PX9 1271 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 TRMOQ9BU70 441 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 POLG2Q9UHN1 485 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 RIMKLBQ9ULI2 386 aa10.53□□□□□ -0.72
CUX1-217ENST00000558836 CORO1CQ9ULV4 474 aaPredicted RBP10.53□□□□□ -0.72
CUX1-217ENST00000558836 CEP290O15078 2479 aa10.52□□□□□ -0.72
CUX1-217ENST00000558836 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 EME2A4GXA9 379 aaPredicted RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 PRORSD1PA6NEY8 169 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 CAPN8A6NHC0 703 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 HIDE1A8MVS5 230 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 SNX2O60749 519 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 INHBCP55103 352 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 GALNT1Q10472 559 aaPredicted RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 LRP8Q14114 963 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 PTRHD1Q6GMV3 140 aaKnown RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 RETSATQ6NUM9 610 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 DNAJC14Q6Y2X3 702 aaPredicted RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 GPSM1Q86YR5 675 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 CDYL2Q8N8U2 506 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 DCAF4L2Q8NA75 395 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 TEX37Q96LM6 180 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 TCF12Q99081 682 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 IL26Q9NPH9 171 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 SLCO3A1Q9UIG8 710 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 LSM7Q9UK45 103 aaKnown RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 PRPF19Q9UMS4 504 aaKnown RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 A0A0J9YYE9 177 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 LEFTY2O00292 366 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 MRASO14807 208 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 NRP2O60462 931 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 PARNO95453 639 aaKnown RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 HLA-FP30511 346 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 GDF5P43026 501 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 PPP3CCP48454 512 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 CLCN7P51798 805 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 ERVFC1P60507 584 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 LCP2Q13094 533 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 CAPRIN1Q14444 709 aaKnown RBP10.52□□□□□ -0.73
CUX1-217ENST00000558836 ARMC3Q5W041 872 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 ITIH5Q86UX2 942 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 TMEM25Q86YD3 366 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 ANKRD27Q96NW4 1050 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 APOL5Q9BWW9 433 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 POPDC3Q9HBV1 291 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 HSFX1Q9UBD0 423 aa10.52□□□□□ -0.73
CUX1-217ENST00000558836 TXNDC9O14530 226 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 GAPDHSO14556 408 aaPredicted RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 SMNDC1O75940 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
CUX1-217ENST00000558836 OR4F21O95013 312 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 OLFM2O95897 454 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 HSPA1AP0DMV8 641 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 HSPA1BP0DMV9 641 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 GPX3P22352 226 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 WEE1P30291 646 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 ADSLP30566 484 aaPredicted RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 CASP2P42575 452 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 PIK3CGP48736 1102 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 STX1BP61266 288 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 ATP6V0D1P61421 351 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 STX5Q13190 355 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 RPS6KA2Q15349 733 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 TGFBIQ15582 683 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 AAK1Q2M2I8 961 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 PLEKHG6Q3KR16 790 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms