RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TMPRSS15P98073 1019 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 CFHR1Q03591 330 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ZFP36L1Q07352 338 aaKnown RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 KIF5AQ12840 1032 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 SLC1A5Q15758 541 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ATP13A5Q4VNC0 1218 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 SOWAHCQ53LP3 525 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ANKRD20A2Q5SQ80 823 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ARHGAP40Q5TG30 622 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ANKRD20A1Q5TYW2 823 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ANKRD20A3Q5VUR7 823 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ZFAND4Q86XD8 727 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 JPH3Q8WXH2 748 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 USP7Q93009 1102 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 LIN37Q96GY3 246 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 CCDC74BQ96LY2 380 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 SLC38A3Q99624 504 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 SCHIP1Q9P0W5 487 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 VPS18Q9P253 973 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 KLHL3Q9UH77 587 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 R3HDM2Q9Y2K5 976 aaKnown RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 ARL5AQ9Y689 179 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 IGHV1OR21-1A0A087WYE8 117 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 BTNL10A8MVZ5 291 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CCL22O00626 93 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 DDX3YO15523 660 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CDK14O94921 469 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CPNE6O95741 557 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 PNLIPP16233 465 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 RPL10P27635 214 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 PBLDP30039 288 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CCKBRP32239 447 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CSF2RBP32927 897 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 DRG2P55039 364 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 GEMP55040 296 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 ERVPABLB-1P60509 514 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 COPS2P61201 443 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 XRCC4Q13426 336 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 INSCQ1MX18 579 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CDKL3Q8IVW4 592 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 NCSTNQ92542 709 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 AHCYL2Q96HN2 611 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 TBC1D10AQ9BXI6 508 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 GBA3Q9H227 469 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CARD9Q9H257 536 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 PRORYQ9H606 182 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 IL26Q9NPH9 171 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 PIH1D1Q9NWS0 290 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
SMAD3-208ENST00000558827 IL17CQ9P0M4 197 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 FAM8A1Q9UBU6 413 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 TRHDEQ9UKU6 1024 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 PCDHGA8Q9Y5G5 932 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 CAPN6Q9Y6Q1 641 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 ATRXP46100 2492 aa12.36□□□□□ -0.43
SMAD3-208ENST00000558827 MGAQ8IWI9 3026 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 IGHV5-10-1A0A0J9YXX1 117 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 PDZK1P1A8MUH7 402 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 STX7O15400 261 aaKnown RBP12.35□□□□□ -0.43
SMAD3-208ENST00000558827 PRAMEF10O60809 474 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 TJP3O95049 919 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 PRB1P04280 392 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-208ENST00000558827 TYRP1P17643 537 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 TPH1P17752 444 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 CDC25BP30305 580 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 CETN2P41208 172 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 DCDC1P59894 354 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 HHEXQ03014 270 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 MPP3Q13368 585 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 LRP8Q14114 963 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 KCTD19Q17RG1 926 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-208ENST00000558827 ITPRIPL1Q6GPH6 555 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 IYDQ6PHW0 289 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 DET1Q7L5Y6 550 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF438Q7Z4V0 828 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 TRAPPC5Q8IUR0 188 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 SFRP1Q8N474 314 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 PMEPA1Q969W9 287 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 VAT1Q99536 393 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 FAM96AQ9H5X1 160 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 FOXJ2Q9P0K8 574 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 GUCA1BQ9UMX6 200 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
SMAD3-208ENST00000558827 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms