RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ZFYVE1Q9HBF4 777 aa10.47□□□□□ -0.73
TPM1-210ENST00000558264 CACNA2D2Q9NY47 1150 aa10.47□□□□□ -0.73
TPM1-210ENST00000558264 CXXC1Q9P0U4 656 aaPredicted RBP10.47□□□□□ -0.73
TPM1-210ENST00000558264 DNMT3BQ9UBC3 853 aaKnown RBP10.47□□□□□ -0.73
TPM1-210ENST00000558264 ZNF225Q9UK10 706 aa10.47□□□□□ -0.73
TPM1-210ENST00000558264 AK5Q9Y6K8 562 aa10.47□□□□□ -0.73
TPM1-210ENST00000558264 GAPDHSO14556 408 aaPredicted RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 SNX2O60749 519 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 DNAJA2O60884 412 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 ZNF821O75541 412 aaPredicted RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 UBTFL6P0CB48 400 aaPredicted RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 HGFP14210 728 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 HOXB8P17481 243 aaPredicted RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 CES1P23141 567 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 HLA-FP30511 346 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 HMGCLP35914 325 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 DIO3P55073 304 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 PSME3P61289 254 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 YBX1P67809 324 aaKnown RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 CREB5Q02930 508 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 PLEKHG6Q3KR16 790 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 SFT2D3Q587I9 215 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 HABP4Q5JVS0 413 aaKnown RBP10.46□□□□□ -0.73
TPM1-210ENST00000558264 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 ANKS6Q68DC2 871 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 ISLR2Q6UXK2 745 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 KBTBD6Q86V97 674 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 TMEM25Q86YD3 366 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 GPSM1Q86YR5 675 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 FUNDC1Q8IVP5 155 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 OR52B6Q8NGF0 335 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 SERPINI1Q99574 410 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 TCF25Q9BQ70 676 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 HGH1Q9BTY7 390 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 C1orf50Q9BV19 199 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 RETREG1Q9H6L5 497 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 IL26Q9NPH9 171 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 POLG2Q9UHN1 485 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 PCDHGA7Q9Y5G6 932 aa10.46□□□□□ -0.73
TPM1-210ENST00000558264 OBSL1O75147 1896 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 TRAV19A0A0A6YYK7 116 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 NPIPB15A6NHN6 443 aaPredicted RBP10.46□□□□□ -0.74
TPM1-210ENST00000558264 NEDD8-MDP1E9PL57 170 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 MRASO14807 208 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 KATNA1O75449 491 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 CTSAP10619 480 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 BPIP17213 487 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 CLCN7P51798 805 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 NTHL1P78549 312 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 CACNG1Q06432 222 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 GALNT1Q10472 559 aaPredicted RBP10.46□□□□□ -0.74
TPM1-210ENST00000558264 LCP2Q13094 533 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 HERC3Q15034 1050 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 GRAMD1BQ3KR37 738 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 PLA2G4EQ3MJ16 856 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 VPS26BQ4G0F5 336 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 KANK2Q63ZY3 851 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.74
TPM1-210ENST00000558264 ZNF783Q6ZMS7 281 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 SPATA24Q86W54 205 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 NKAPQ8N5F7 415 aaKnown RBP10.46□□□□□ -0.74
TPM1-210ENST00000558264 CDYL2Q8N8U2 506 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 KLHL32Q96NJ5 620 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 ECSITQ9BQ95 431 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 APOL5Q9BWW9 433 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 EBF3Q9H4W6 596 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 C11orf49Q9H6J7 331 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 PCTPQ9UKL6 214 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 PRPF19Q9UMS4 504 aaKnown RBP10.46□□□□□ -0.74
TPM1-210ENST00000558264 HCFC2Q9Y5Z7 792 aa10.46□□□□□ -0.74
TPM1-210ENST00000558264 A0A0J9YYE9 177 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 OR4F21O95013 312 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 TRBC1P01850 177 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 SNRPB2P08579 225 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 ME2P23368 584 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 WEE1P30291 646 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 PTGER3P43115 390 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 AQP4P55087 323 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 STX1BP61266 288 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 ATP6V0D1P61421 351 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 AP1S1P61966 158 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CAPRIN1Q14444 709 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 TGFBIQ15582 683 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CHRNA6Q15825 494 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 FUT11Q495W5 492 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 AAGABQ6PD74 315 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CYP2R1Q6VVX0 501 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 FRA10AC1Q70Z53 315 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 NAT16Q8N8M0 369 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 GRIN3AQ8TCU5 1115 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 NUDT8Q8WV74 236 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 JADE3Q92613 823 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 KCNJ9Q92806 393 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 P2RY12Q9H244 342 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CXorf56Q9H5V9 222 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 ZDHHC6Q9H6R6 413 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 MAGEE1Q9HCI5 957 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 SLCO3A1Q9UIG8 710 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 PRMT5O14744 637 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms