RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KLC4Q9NSK0 619 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 CTTNBP2NLQ9P2B4 639 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 SLC23A2Q9UGH3 650 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 SPTA1P02549 2419 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 PRR19A6NJB7 356 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 GPR89AB7ZAQ6 455 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 SLC25A14O95258 325 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-224ENST00000557713 GPR89BP0CG08 455 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 PRKAR1AP10644 381 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 CASRP41180 1078 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 SLC19A1P41440 591 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 STAT5AP42229 794 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 GFERP55789 205 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 GALNT3Q14435 633 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 FAM182AQ5T1J6 154 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 TMEM26Q6ZUK4 368 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 KDELC2Q7Z4H8 507 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 TMC3Q7Z5M5 1100 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 TRAM1L1Q8N609 369 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 C9orf43Q8TAL5 461 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-224ENST00000557713 RAPGEF5Q92565 580 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 IQCDQ96DY2 449 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 C9orf72Q96LT7 481 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 ZSCAN5AQ9BUG6 496 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 SPATA16Q9BXB7 569 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 MAGEE1Q9HCI5 957 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF624Q9P2J8 865 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-224ENST00000557713 UVRAGQ9P2Y5 699 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 NFKBIL1Q9UBC1 381 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-224ENST00000557713 ANAPC2Q9UJX6 822 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
SCFD1-224ENST00000557713 SLC30A1Q9Y6M5 507 aa15.73■□□□□ 0.11
SCFD1-224ENST00000557713 TOX3O15405 576 aaPredicted RBP15.72■□□□□ 0.11
SCFD1-224ENST00000557713 H2AFZP0C0S5 128 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 F8A1P23610 371 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 UBASH3AP57075 661 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 DCDC1P59894 354 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 MC1RQ01726 317 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 DEFB109BQ30KR1 87 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF569Q5MCW4 686 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 PDPK2PQ6A1A2 396 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 CAVIN1Q6NZI2 390 aaKnown RBP15.72■□□□□ 0.11
SCFD1-224ENST00000557713 H2AFVQ71UI9 128 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 ESX1Q8N693 406 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 PLD5Q8N7P1 536 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 APOBEC4Q8WW27 367 aaKnown RBP15.72■□□□□ 0.11
SCFD1-224ENST00000557713 STARD8Q92502 1023 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 GLYATL1Q969I3 302 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 TADA1Q96BN2 335 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 IMP4Q96G21 291 aaKnown RBP15.72■□□□□ 0.11
SCFD1-224ENST00000557713 ABHD17AQ96GS6 310 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 CBX8Q9HC52 389 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF71Q9NQZ8 489 aaPredicted RBP15.72■□□□□ 0.11
SCFD1-224ENST00000557713 SHOC2Q9UQ13 582 aa15.72■□□□□ 0.11
SCFD1-224ENST00000557713 FLNCQ14315 2725 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 KMOO15229 486 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 UBXN7O94888 489 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 VIPP01282 170 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 GYPCP04921 128 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 PIRTP0C851 137 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF28P17035 718 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF7P17097 686 aaPredicted RBP15.71■□□□□ 0.11
SCFD1-224ENST00000557713 TYRP1P17643 537 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 TCN2P20062 427 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 FOXK1P85037 733 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 IGFBP7Q16270 282 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ATP1A1-AS1Q5TC04 95 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ALS2CLQ60I27 953 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ABRAXAS1Q6UWZ7 409 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 LUZP1Q86V48 1076 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF830Q96NB3 372 aaPredicted RBP15.71■□□□□ 0.11
SCFD1-224ENST00000557713 PACSIN1Q9BY11 444 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 CEP41Q9BYV8 373 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 BRD8Q9H0E9 1235 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 OSGEPL1Q9H4B0 414 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 RAD18Q9NS91 495 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 LCMT1Q9UIC8 334 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 TMPRSS11EQ9UL52 423 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 MRPS18BQ9Y676 258 aaKnown RBP15.71■□□□□ 0.11
SCFD1-224ENST00000557713 RPS6KL1Q9Y6S9 549 aa15.71■□□□□ 0.11
SCFD1-224ENST00000557713 C3orf70A6NLC5 250 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-224ENST00000557713 ZNF487B1APH4 448 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 MTA2O94776 668 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 BRAFP15056 766 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 HNRNPH3P31942 346 aaKnown RBP15.7■□□□□ 0.1
SCFD1-224ENST00000557713 LEPRP48357 1165 aaKnown RBP15.7■□□□□ 0.1
SCFD1-224ENST00000557713 CDK18Q07002 472 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 FOXM1Q08050 763 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 INSCQ1MX18 579 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 SLC9A4Q6AI14 798 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 C16orf46Q6P387 395 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 CRTC3Q6UUV7 619 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 C6orf15Q6UXA7 325 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-224ENST00000557713 NT5DC3Q86UY8 548 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 LRRTM4Q86VH4 590 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 ZNF547Q8IVP9 402 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-224ENST00000557713 TIMM29Q9BSF4 260 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 SLC25A51Q9H1U9 297 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 ZNF768Q9H5H4 540 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms