RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 GNPDA1P46926 289 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PPARDQ03181 441 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 GTF2H3Q13889 308 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 DBN1Q16643 649 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 KYNUQ16719 465 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 FAM153CQ494X1 144 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 TRMT10BQ6PF06 316 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CRTC3Q6UUV7 619 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 C3orf62Q6ZUJ4 267 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ADGRG6Q86SQ4 1221 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ZCCHC2Q9C0B9 1178 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 GPR27Q9NS67 375 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PRSS38A1L453 326 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 OR2AG2A6NM03 316 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 CFAP99D6REC4 459 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 PROB1E7EW31 1015 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 NDUFS3O75489 264 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 RASGRP1O95267 797 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNF8P17098 575 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 IL9RQ01113 521 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 EIF2B5Q13144 721 aaKnown RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 HLA-BQ31612 363 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 STEAP4Q687X5 459 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 TRAPPC5Q8IUR0 188 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 RBFAQ8N0V3 343 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 CCDC97Q96F63 343 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 FAM167BQ9BTA0 163 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 PARD6BQ9BYG5 372 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 GAREM1Q9H706 876 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 ZDHHC3Q9NYG2 299 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 ABCA7Q8IZY2 2146 aa13.89□□□□□ -0.19
VIPAS39-208ENST00000556412 TRBV5-4A0A0C4DH59 114 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 UBA6A0AVT1 1052 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 AGAP14A8MT82 685 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 OR1I1O60431 355 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 SDC3O75056 442 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 ACSL3O95573 720 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 ZNF806P0C7X5 589 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 JUNDP17535 347 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 TNFRSF8P28908 595 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 PPARGP37231 505 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 TTPAP49638 278 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 GPX6P59796 221 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 CBLBQ13191 982 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 CTBP1Q13363 440 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 SLMAPQ14BN4 828 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 PLA2G4EQ3MJ16 856 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 LYPLAL1Q5VWZ2 237 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 IL27RAQ6UWB1 636 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 CERS6Q6ZMG9 384 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 GALNT13Q8IUC8 556 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 DENND6AQ8IWF6 608 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 PHACTR4Q8IZ21 702 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 RASGEF1AQ8N9B8 481 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 CALML6Q8TD86 181 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 ELF4Q99607 663 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 SLC13A1Q9BZW2 595 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 TCEAL2Q9H3H9 227 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 LRRC4CQ9HCJ2 640 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 PARD6AQ9NPB6 346 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 NINJ2Q9NZG7 142 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 VPS18Q9P253 973 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 APOBEC3BQ9UH17 382 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 KLF15Q9UIH9 416 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
VIPAS39-208ENST00000556412 LNP1A1A4G5 178 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PFDN6O15212 129 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 VEGFDO43915 354 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 PIAS1O75925 651 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 TNFP01375 233 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CTSEP14091 401 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 MCM3P25205 808 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 SLC1A2P43004 574 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 B4GALNT1Q00973 533 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 MGAT5Q09328 741 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CSRP2Q16527 193 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 CLDN19Q8N6F1 224 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 EIF1ADQ8N9N8 165 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 GABPB2Q8TAK5 448 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 SGF29Q96ES7 293 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 SGSM3Q96HU1 749 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 ZDHHC5Q9C0B5 715 aa13.87□□□□□ -0.19
VIPAS39-208ENST00000556412 FBXO6Q9NRD1 293 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms