RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CRLS1Q9UJA2 301 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 TMEM98Q9Y2Y6 226 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 PI4KAP42356 2102 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 MYLKQ15746 1914 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CACNA1EQ15878 2313 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 A0A1B0GTQ1 180 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PRSS38A1L453 326 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SPAG6O75602 509 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CDK14O94921 469 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TNFP01375 233 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TUBBP07437 444 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PRSS56P0CW18 603 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF8P17098 575 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 ENGP17813 658 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 OGNP20774 298 aaKnown RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SSTR1P30872 391 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PPARGP37231 505 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 NSG1P42857 185 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 POLD2P49005 469 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TTPAP49638 278 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 HK3P52790 923 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 GPX6P59796 221 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 B4GALNT1Q00973 533 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PPARDQ03181 441 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SEMA3AQ14563 771 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SHBQ15464 509 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CCDC6Q16204 474 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 DBN1Q16643 649 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 ALG11Q2TAA5 492 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 HLA-BQ31612 363 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PYCR3Q53H96 274 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 AARS2Q5JTZ9 985 aaKnown RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 MRNIPQ6NTE8 343 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 MICALCLQ6ZW33 695 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TAS2R42Q7RTR8 314 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 SDCCAG8Q86SQ7 713 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TRIM74Q86UV6 250 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CCDC25Q86WR0 208 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CILP2Q8IUL8 1156 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 DCLK2Q8N568 766 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 OR1E3Q8WZA6 343 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 CERS2Q96G23 380 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 C9orf72Q96LT7 481 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 COPS8Q99627 209 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 FUT8Q9BYC5 575 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 TXLNGYQ9BZA5 131 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 FGF22Q9HCT0 170 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 C20orf96Q9NUD7 363 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 GPR34Q9UPC5 381 aa12.54□□□□□ -0.4
SYNE2-219ENST00000555323 DNMT3AQ9Y6K1 912 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
SYNE2-219ENST00000555323 LNP1A1A4G5 178 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 GOLGA8TH3BQL2 631 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 YKT6O15498 198 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 SGTAO43765 313 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 MTX2O75431 263 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 RASGRP1O95267 797 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 ASMTLO95671 621 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 CER1O95813 267 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 C1QAP02745 245 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 MYBL2P10244 700 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 RALBP11234 206 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 MSH3P20585 1137 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 MCM3P25205 808 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 THOC5Q13769 683 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 HSP90AA5PQ58FG0 334 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF648Q5T619 568 aaPredicted RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TEDDM1Q5T9Z0 273 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TCEAL6Q6IPX3 200 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TRMT10BQ6PF06 316 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 DBX2Q6ZNG2 339 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 GALNT7Q86SF2 657 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 KCNMB4Q86W47 210 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 UNC5BQ8IZJ1 945 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 RASGEF1AQ8N9B8 481 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 GDAP1Q8TB36 358 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF514Q96K75 400 aaPredicted RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 LINC00615Q96LM1 132 aaPredicted RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 ZCCHC2Q9C0B9 1178 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 OR2AG1Q9H205 316 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 SMOC1Q9H4F8 434 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 MRPL40Q9NQ50 206 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms