RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR52K1Q8NGK4 314 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 ZNF398Q8TD17 642 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 MAGOHBQ96A72 148 aaKnown RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 ULK4Q96C45 1275 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 DCUN1D1Q96GG9 259 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 GFM1Q96RP9 751 aaKnown RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 OSBPL9Q96SU4 736 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 ASB8Q9H765 288 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 PIH1D1Q9NWS0 290 aaKnown RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 LRIT1Q9P2V4 623 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 CRLS1Q9UJA2 301 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 PLEKHM1Q9Y4G2 1056 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 SLC30A1Q9Y6M5 507 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 APC2O95996 2303 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 CFAP99D6REC4 459 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 NUDT21O43809 227 aaKnown RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 NOBOXO60393 691 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A9O60656 530 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 TCEA3O75764 348 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 SRP72O76094 671 aaKnown RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 ECEL1O95672 775 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 RPLP0P05388 317 aaKnown RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A6P19224 532 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A1P22309 533 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A4P22310 534 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A3P35503 534 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A5P35504 534 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 KCNJ1P48048 391 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 MAZP56270 477 aaKnown RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 TMEM115Q12893 351 aaPredicted RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 NFATC2Q13469 925 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 HLTFQ14527 1009 aaKnown RBP eCLIP11.95□□□□□ -0.5
SRP54-206ENST00000555317 PTPRCAPQ14761 206 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 SKIDA1Q1XH10 827 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 GPRC6AQ5T6X5 926 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 CCNJLQ8IV13 435 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 RASGEF1CQ8N431 466 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 DCBLD1Q8N8Z6 715 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 PRELID2Q8N945 189 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 AVL9Q8NBF6 648 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 DDHD1Q8NEL9 900 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 OR13C4Q8NGS5 318 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 GRK7Q8WTQ7 553 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 NXPE2Q96DL1 559 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 MS4A14Q96JA4 679 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 DNAJC1Q96KC8 554 aaKnown RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 C19orf43Q9BQ61 176 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 AP1M1Q9BXS5 423 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A7Q9HAW7 530 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A10Q9HAW8 530 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 UGT1A8Q9HAW9 530 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 KLC4Q9NSK0 619 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 SMOXQ9NWM0 555 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
SRP54-206ENST00000555317 SNX12Q9UMY4 172 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 DNAJC16Q9Y2G8 782 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 KCTD3Q9Y597 815 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 USP24Q9UPU5 2620 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 FREM2Q5SZK8 3169 aa11.95□□□□□ -0.5
SRP54-206ENST00000555317 CACNA1BQ00975 2339 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 ASPMQ8IZT6 3477 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 HEATR9A2RTY3 570 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 USP27XA6NNY8 438 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 C1QTNF9BB2RNN3 333 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 AP3B1O00203 1094 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 CES2O00748 559 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 GPR39O43194 453 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 CSO75390 466 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 SUN1O94901 812 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 C1QTNF9P0C862 333 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 ZSCAN5DPP0CG00 497 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 PNLIPP16233 465 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 ZNF7P17097 686 aaPredicted RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 MC4RP32245 332 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 RPL22P35268 128 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 SARNPP82979 210 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 ZRANB3Q5FWF4 1079 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 NLRP9Q7RTR0 991 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 TAS2R42Q7RTR8 314 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 SNX20Q7Z614 316 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 MARCH9Q86YJ5 346 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 CACTIN-AS1Q8N1I8 211 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 PPHLN1Q8NEY8 458 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 COG1Q8WTW3 980 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 STYXQ8WUJ0 223 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 ZCCHC14Q8WYQ9 949 aaKnown RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 GATA6Q92908 595 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.94□□□□□ -0.5
SRP54-206ENST00000555317 ZNF514Q96K75 400 aaPredicted RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 NAPGQ99747 312 aaPredicted RBP11.94□□□□□ -0.5
SRP54-206ENST00000555317 TIMM29Q9BSF4 260 aa11.94□□□□□ -0.5
SRP54-206ENST00000555317 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms