RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MYADMQ96S97 322 aa8.82□□□□□ -1
TDP1-210ENST00000554976 ERVK-6Q9BXR3 956 aa8.82□□□□□ -1
TDP1-210ENST00000554976 PIDD1Q9HB75 910 aa8.82□□□□□ -1
TDP1-210ENST00000554976 TXLNGQ9NUQ3 528 aa8.82□□□□□ -1
TDP1-210ENST00000554976 IL36AQ9UHA7 158 aa8.82□□□□□ -1
TDP1-210ENST00000554976 MBD1Q9UIS9 605 aaPredicted RBP8.82□□□□□ -1
TDP1-210ENST00000554976 APPL1Q9UKG1 709 aa8.82□□□□□ -1
TDP1-210ENST00000554976 SORCS3Q9UPU3 1222 aa8.82□□□□□ -1
TDP1-210ENST00000554976 XIRP2A4UGR9 3374 aa8.82□□□□□ -1
TDP1-210ENST00000554976 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
TDP1-210ENST00000554976 MGRN1O60291 552 aa8.82□□□□□ -1
TDP1-210ENST00000554976 RHOBTB1O94844 696 aa8.82□□□□□ -1
TDP1-210ENST00000554976 UGT2B4P06133 528 aa8.82□□□□□ -1
TDP1-210ENST00000554976 KRT16P08779 473 aa8.82□□□□□ -1
TDP1-210ENST00000554976 PMLP29590 882 aa8.82□□□□□ -1
TDP1-210ENST00000554976 VIPR1P32241 457 aa8.82□□□□□ -1
TDP1-210ENST00000554976 ELF3P78545 371 aaPredicted RBP8.82□□□□□ -1
TDP1-210ENST00000554976 PRKAA1Q13131 559 aa8.82□□□□□ -1
TDP1-210ENST00000554976 SETDB1Q15047 1291 aa8.82□□□□□ -1
TDP1-210ENST00000554976 RBBP5Q15291 538 aaKnown RBP8.82□□□□□ -1
TDP1-210ENST00000554976 GPRC6AQ5T6X5 926 aa8.82□□□□□ -1
TDP1-210ENST00000554976 KLC3Q6P597 504 aa8.82□□□□□ -1
TDP1-210ENST00000554976 RINLQ6ZS11 566 aa8.82□□□□□ -1
TDP1-210ENST00000554976 RPS27LQ71UM5 84 aaKnown RBP8.82□□□□□ -1
TDP1-210ENST00000554976 CPSF7Q8N684 471 aaKnown RBP8.82□□□□□ -1
TDP1-210ENST00000554976 PPP1R14CQ8TAE6 165 aa8.82□□□□□ -1
TDP1-210ENST00000554976 EEF1AKMT1Q8WVE0 214 aa8.82□□□□□ -1
TDP1-210ENST00000554976 OR52B2Q96RD2 323 aa8.82□□□□□ -1
TDP1-210ENST00000554976 OSBPL1AQ9BXW6 950 aa8.82□□□□□ -1
TDP1-210ENST00000554976 EBF3Q9H4W6 596 aa8.82□□□□□ -1
TDP1-210ENST00000554976 MEAF6Q9HAF1 191 aa8.82□□□□□ -1
TDP1-210ENST00000554976 SYTL2Q9HCH5 934 aa8.82□□□□□ -1
TDP1-210ENST00000554976 NCKIPSDQ9NZQ3 722 aa8.82□□□□□ -1
TDP1-210ENST00000554976 SARDHQ9UL12 918 aa8.82□□□□□ -1
TDP1-210ENST00000554976 CDH7Q9ULB5 785 aa8.82□□□□□ -1
TDP1-210ENST00000554976 PLA2G4CQ9UP65 541 aa8.82□□□□□ -1
TDP1-210ENST00000554976 FAM50BQ9Y247 325 aa8.82□□□□□ -1
TDP1-210ENST00000554976 SZT2Q5T011 3432 aa8.82□□□□□ -1
TDP1-210ENST00000554976 C5orf42Q9H799 3197 aa8.82□□□□□ -1
TDP1-210ENST00000554976 RANBP2P49792 3224 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 IQCF5A8MTL0 148 aa8.81□□□□□ -1
TDP1-210ENST00000554976 UBXN8O00124 270 aa8.81□□□□□ -1
TDP1-210ENST00000554976 CDC7O00311 574 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ECI2O75521 394 aa8.81□□□□□ -1
TDP1-210ENST00000554976 NFATC1O95644 943 aa8.81□□□□□ -1
TDP1-210ENST00000554976 HSPA4LO95757 839 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ZNF30P17039 623 aa8.81□□□□□ -1
TDP1-210ENST00000554976 MMP12P39900 470 aa8.81□□□□□ -1
TDP1-210ENST00000554976 RPS6KA3P51812 740 aa8.81□□□□□ -1
TDP1-210ENST00000554976 SEMG2Q02383 582 aa8.81□□□□□ -1
TDP1-210ENST00000554976 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 PDGFRLQ15198 375 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ZNF805Q5CZA5 627 aa8.81□□□□□ -1
TDP1-210ENST00000554976 HENMT1Q5T8I9 393 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 SBSNQ6UWP8 590 aa8.81□□□□□ -1
TDP1-210ENST00000554976 XKR5Q6UX68 686 aa8.81□□□□□ -1
TDP1-210ENST00000554976 GET4Q7L5D6 327 aaPredicted RBP8.81□□□□□ -1
TDP1-210ENST00000554976 HSD11B1LQ7Z5J1 315 aa8.81□□□□□ -1
TDP1-210ENST00000554976 RAVER1Q8IY67 606 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 NKAPQ8N5F7 415 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 PPP4R1Q8TF05 950 aa8.81□□□□□ -1
TDP1-210ENST00000554976 SGF29Q96ES7 293 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ILKAPQ9H0C8 392 aaPredicted RBP8.81□□□□□ -1
TDP1-210ENST00000554976 NSUN3Q9H649 340 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 ELOVL2Q9NXB9 296 aa8.81□□□□□ -1
TDP1-210ENST00000554976 UBA6A0AVT1 1052 aaPredicted RBP8.81□□□□□ -1
TDP1-210ENST00000554976 NPEPPSL1A6NEC2 478 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ANTXRLA6NF34 631 aa8.81□□□□□ -1
TDP1-210ENST00000554976 UPK3BL1B0FP48 263 aa8.81□□□□□ -1
TDP1-210ENST00000554976 TMEM233B4DJY2 109 aa8.81□□□□□ -1
TDP1-210ENST00000554976 UPK3BL2E5RIL1 263 aa8.81□□□□□ -1
TDP1-210ENST00000554976 F8W8V4 182 aa8.81□□□□□ -1
TDP1-210ENST00000554976 PRMT5O14744 637 aaPredicted RBP8.81□□□□□ -1
TDP1-210ENST00000554976 HNRNPCL1O60812 293 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 TBX10O75333 385 aa8.81□□□□□ -1
TDP1-210ENST00000554976 CD1EP15812 388 aa8.81□□□□□ -1
TDP1-210ENST00000554976 METAP1P53582 386 aa8.81□□□□□ -1
TDP1-210ENST00000554976 TBCCQ15814 346 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ARSIQ5FYB1 569 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ZDHHC20Q5W0Z9 365 aa8.81□□□□□ -1
TDP1-210ENST00000554976 CHSY3Q70JA7 882 aa8.81□□□□□ -1
TDP1-210ENST00000554976 PARS2Q7L3T8 475 aaKnown RBP8.81□□□□□ -1
TDP1-210ENST00000554976 RBFAQ8N0V3 343 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ELSPBP1Q96BH3 223 aa8.81□□□□□ -1
TDP1-210ENST00000554976 FAM129BQ96TA1 746 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ASB8Q9H765 288 aa8.81□□□□□ -1
TDP1-210ENST00000554976 ARMCX1Q9P291 453 aa8.81□□□□□ -1
TDP1-210ENST00000554976 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
TDP1-210ENST00000554976 SUN2Q9UH99 717 aa8.81□□□□□ -1
TDP1-210ENST00000554976 MSRAQ9UJ68 235 aa8.81□□□□□ -1
TDP1-210ENST00000554976 PPM1HQ9ULR3 514 aa8.81□□□□□ -1
TDP1-210ENST00000554976 A0A1B0GTL3 188 aa8.8□□□□□ -1
TDP1-210ENST00000554976 LRRC14BA6NHZ5 514 aa8.8□□□□□ -1
TDP1-210ENST00000554976 STX16-NPEPL1H3BU86 382 aa8.8□□□□□ -1
TDP1-210ENST00000554976 STX16O14662 325 aa8.8□□□□□ -1
TDP1-210ENST00000554976 HGSO14964 777 aaPredicted RBP8.8□□□□□ -1
TDP1-210ENST00000554976 HDAC3O15379 428 aa8.8□□□□□ -1
TDP1-210ENST00000554976 VPS26AO75436 327 aa8.8□□□□□ -1
TDP1-210ENST00000554976 SOD1P00441 154 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms