RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 YBEYP58557 167 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 CKAP4Q07065 602 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 CD69Q07108 199 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PPIDQ08752 370 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 C2orf54Q08AI8 447 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 XRCC4Q13426 336 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SNX1Q13596 522 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 CDH18Q13634 790 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 POLD3Q15054 466 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PDK1Q15118 436 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PRKD1Q15139 912 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 OASLQ15646 514 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 CCNG2Q16589 344 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 KCTD19Q17RG1 926 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 GEN1Q17RS7 908 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 MUM1Q2TAK8 710 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PARP15Q460N3 678 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 FUT11Q495W5 492 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SLC45A4Q5BKX6 768 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 FAM182AQ5T1J6 154 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 TMEM215Q68D42 235 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF783Q6ZMS7 281 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SFTPA1Q8IWL2 248 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 APCDD1Q8J025 514 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SPATA4Q8NEY3 305 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 OR14C36Q8NHC7 312 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ATXN2LQ8WWM7 1075 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 MAGOHBQ96A72 148 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 HDAC11Q96DB2 347 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF419Q96HQ0 510 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 RAX2Q96IS3 184 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 TSGA13Q96PP4 275 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 QKIQ96PU8 341 aaKnown RBP eCLIP6.38□□□□□ -1.396e-6■■□□□ 11.6
SCFD1-212ENST00000554486 ASB2Q96Q27 587 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 LGMNQ99538 433 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 CARD6Q9BX69 1037 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ACE2Q9BYF1 805 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SLC2A11Q9BYW1 496 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 FRMD8P1Q9BZ68 369 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 MAGEH1Q9H213 219 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 USP29Q9HBJ7 922 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 FBRSL1Q9HCM7 1045 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SLC2A4RGQ9NR83 387 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 POLR3BQ9NW08 1133 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 IPO11Q9UI26 975 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 GGA2Q9UJY4 613 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 RAD54BQ9Y620 910 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 A0A0C4DFX4 3053 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 GOLGA6L10A0A0M3HER8 536 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BCLAF3A2AJT9 711 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ANTXRLA6NF34 631 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 HACD1B0YJ81 288 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 J3KR12 359 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 MCF2LO15068 1137 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 NCAM2O15394 837 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 KDELR3O43731 214 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 PRAMEF11O60813 436 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 CD160O95971 181 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 CCNCP24863 283 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 RBL1P28749 1068 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 COILP38432 576 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 EIF2DP41214 584 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 FNTAP49354 379 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 RRADP55042 308 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ARF5P84085 180 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 KDSRQ06136 332 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 IL10RBQ08334 325 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 WASHC5Q12768 1159 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 TDGQ13569 410 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 SLC12A1Q13621 1099 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BYSLQ13895 437 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 USP10Q14694 798 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 IL31Q6EBC2 164 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DARS2Q6PI48 645 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 LEKR1Q6ZMV7 388 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BZW1Q7L1Q6 419 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ADIPOR2Q86V24 386 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 LRRC49Q8IUZ0 686 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC117Q8IWD4 279 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 KLHL7Q8IXQ5 586 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 ATPAF2Q8N5M1 289 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DCAF4L2Q8NA75 395 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 NOA1Q8NC60 698 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 CCNYQ8ND76 341 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 PIK3C3Q8NEB9 887 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 CSGALNACT1Q8TDX6 532 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 TFB1MQ8WVM0 346 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 SORCS1Q8WY21 1168 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 MAML1Q92585 1016 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 DNASE1L2Q92874 299 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 FATE1Q969F0 183 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 TTC17Q96AE7 1141 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 HIST1H2AHQ96KK5 128 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 XPO6Q96QU8 1125 aaKnown RBP6.37□□□□□ -1.39
SCFD1-212ENST00000554486 HIST1H2AJQ99878 128 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 TMEM121Q9BTD3 319 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 OSBPL6Q9BZF3 934 aa6.37□□□□□ -1.39
SCFD1-212ENST00000554486 BRD8Q9H0E9 1235 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms