RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 BMP2P12643 396 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 HGFP14210 728 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 MAGEA10P43363 369 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 ALDH7A1P49419 539 aaKnown RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 RCAN2Q14206 197 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 INPP5AQ14642 412 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 PTPRCAPQ14761 206 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 XKR7Q5GH72 579 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 LCN8Q6JVE9 175 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 ALDH16A1Q8IZ83 802 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 GPR21Q99679 349 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 ACTR3BQ9P1U1 418 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 POLG2Q9UHN1 485 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 PCTPQ9UKL6 214 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
SHMT2-205ENST00000553474 TNPO3Q9Y5L0 923 aaKnown RBP12.81□□□□□ -0.36
SHMT2-205ENST00000553474 TBKBP1A7MCY6 615 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CBX4O00257 560 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 BTN3A1O00481 513 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CLPTM1O96005 669 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 FGBP02675 491 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CYBBP04839 570 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 C7P10643 843 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 PSMC3P17980 439 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 MC4RP32245 332 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 RGRP47804 291 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 TSNQ15631 228 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 PDCD4Q53EL6 469 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 NCEH1Q6PIU2 408 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.364e-7■□□□□ 9.3
SHMT2-205ENST00000553474 C16orf59Q7L2K0 433 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 METTL3Q86U44 580 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 ANKFN1Q8N957 763 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 FAM156AQ8NDB6 213 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 LPCAT1Q8NF37 534 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 OR9I1Q8NGQ6 314 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 ZNF461Q8TAF7 563 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 ZNF382Q96SR6 550 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 KLF16Q9BXK1 252 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 PCDHAC1Q9H158 963 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 MUC3BQ9H195 1237 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 MAGEE1Q9HCI5 957 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 FBRSL1Q9HCM7 1045 aaKnown RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CCM2LQ9NUG4 571 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-205ENST00000553474 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 ZIM2Q9NZV7 527 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 PKP3Q9Y446 797 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 GPR45Q9Y5Y3 372 aa12.8□□□□□ -0.36
SHMT2-205ENST00000553474 CXorf51AA0A1B0GTR3 108 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 E5RI56 91 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 IFRD1O00458 451 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 NR5A2O00482 541 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SNX2O60749 519 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ABLIM3O94929 683 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 GJB5O95377 273 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TSPAN12O95859 305 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 C1RP00736 705 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 KLKB1P03952 638 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 FCGR1AP12314 374 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TSPAN8P19075 237 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 OR1D2P34982 312 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 HMGCLP35914 325 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 MAPK8P45983 427 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 KCNK10P57789 538 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 AP1S1P61966 158 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ERVK-8P63133 956 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CACNG1Q06432 222 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 DYNC1I2Q13409 638 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 AASDHQ4L235 1098 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 INTS11Q5TA45 600 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 METTL2BQ6P1Q9 378 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 ADAMTSL2Q86TH1 951 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 RETREG3Q86VR2 466 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 GPSM1Q86YR5 675 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TTC30BQ8N4P2 665 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 PNPLA1Q8N8W4 532 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 CD200R1Q8TD46 325 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 LRRC58Q96CX6 371 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 DGCR14Q96DF8 476 aaKnown RBP12.79□□□□□ -0.36
SHMT2-205ENST00000553474 TRIM4Q9C037 500 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 AIG1Q9NVV5 245 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
SHMT2-205ENST00000553474 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms