RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MYF6P23409 242 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CD86P42081 329 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CRKLP46109 303 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 RARRES1P49788 294 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 LIMK1P53667 647 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 RAD23BP54727 409 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SNU13P55769 128 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TMPRSS3P57727 454 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 ASIC1P78348 528 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SIM1P81133 766 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SETMARQ53H47 684 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CCDC158Q5M9N0 1113 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 DNTTIP2Q5QJE6 756 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 HEPHL1Q6MZM0 1159 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 FAM57BQ71RH2 274 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 MTSS1LQ765P7 747 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SLC9B2Q86UD5 537 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 PEX5LQ8IYB4 626 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 GALNT16Q8N428 558 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 C9orf43Q8TAL5 461 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CEP76Q8TAP6 659 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 UTP15Q8TED0 518 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 ATL1Q8WXF7 558 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 ADAMTS14Q8WXS8 1223 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 MAP4K1Q92918 833 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 ERLEC1Q96DZ1 483 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 C8orf49Q96NF6 230 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TIMP4Q99727 224 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SPXQ9BT56 116 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 B3GNT4Q9C0J1 378 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 NPFFR1Q9GZQ6 430 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM206Q9H813 350 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CPNE5Q9HCH3 593 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SPAG4Q9NPE6 437 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 VPS18Q9P253 973 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 RCOR1Q9UKL0 485 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 ITGA11Q9UKX5 1188 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TSC22D4Q9Y3Q8 395 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 KIR2DS5A0A0G2JLQ3 304 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 KRT87PA6NCN2 255 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 EIF4E1BA6NMX2 242 aaKnown RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 F8W810 466 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 KIR2DS3K7RE56 304 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 SLC30A4O14863 429 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 CREG1O75629 220 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 HMOX1P09601 288 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 FAM200BP0CF97 657 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 PCP11498 1178 aaKnown RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 WT1P19544 449 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 ADORA2A-AS1P86434 159 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 STIM1Q13586 685 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 AKNAD1Q5T1N1 836 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 ZNF813Q6ZN06 617 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 C15orf39Q6ZRI6 1047 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 MB21D2Q8IYB1 491 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 ZNF595Q8IYB9 648 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 EXD1Q8NHP7 514 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 SEPT1Q8WYJ6 367 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 DNASE1L2Q92874 299 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 DVL3Q92997 716 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 ZFYVE19Q96K21 471 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 UROC1Q96N76 676 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 RUNDC3BQ96NL0 473 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 SH3GL2Q99962 352 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 RAD21L1Q9H4I0 556 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 AAMDCQ9H7C9 122 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 PPP1R3EQ9H7J1 279 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 PRMT7Q9NVM4 692 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 CNIH4Q9P003 139 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 HOOK1Q9UJC3 728 aaKnown RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 ADAM21Q9UKJ8 722 aa5.74□□□□□ -1.49
SCFD1-208ENST00000553278 CNOT11Q9UKZ1 510 aaKnown RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 TTC7AQ9ULT0 858 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-208ENST00000553278 COL4A3Q01955 1670 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 A0A1W2PPM1 405 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 NDUFS4O43181 175 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 TSPAN1O60635 241 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 STAM2O75886 525 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 MOCS3O95396 460 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 SLC4A1P02730 911 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 KLKB1P03952 638 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 CYC1P08574 325 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 MAOAP21397 527 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 GPD1P21695 349 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 NMBRP28336 390 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 KHKP50053 298 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 CDH12P55289 794 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 NPRL3Q12980 569 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 MAD2L1Q13257 205 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-208ENST00000553278 TAZQ16635 292 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 MEP1AQ16819 746 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 FUT11Q495W5 492 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 MIDNQ504T8 468 aa5.73□□□□□ -1.49
SCFD1-208ENST00000553278 SLC39A12Q504Y0 691 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms