RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 APODP05090 189 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ATP5BP06576 529 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 SRPRAP08240 638 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 DLDP09622 509 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 MYCLP1P12525 358 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 KRT10P13645 584 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ALADP13716 330 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 POLR2EP19388 210 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HLA-FP30511 346 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 CD70P32970 193 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 GARSP41250 739 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 LSSP48449 732 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 DNA2P51530 1060 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 STARD6P59095 220 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PHC1P78364 1004 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ECT2LQ008S8 904 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 OCRLQ01968 901 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 GBE1Q04446 702 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 LMAN2Q12907 356 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 RFTN1Q14699 578 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 MLF2Q15773 248 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 CCNG2Q16589 344 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PLEKHG6Q3KR16 790 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FBXO43Q4G163 708 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 INO80DQ53TQ3 878 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FSCBQ5H9T9 825 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PITRM1Q5JRX3 1037 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC181Q5TID7 509 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 RNF219Q5W0B1 726 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 DRICH1Q6PGQ1 229 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 SYT10Q6XYQ8 523 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF852Q6ZMS4 543 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FKBP9P1Q75LS8 142 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ADIPOR2Q86V24 386 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ARHGAP12Q8IWW6 846 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ATPAF2Q8N5M1 289 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 TERB1Q8NA31 727 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 COG1Q8WTW3 980 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 UCMAQ8WVF2 138 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ARHGEF2Q92974 986 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HAUS1Q96CS2 278 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HDAC11Q96DB2 347 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 CHFRQ96EP1 664 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 OLFM3Q96PB7 478 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 QKIQ96PU8 341 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FERMT1Q9BQL6 677 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HEMGNQ9BXL5 484 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 OSBPL6Q9BZF3 934 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ARHGEF3Q9NR81 526 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HEBP1Q9NRV9 189 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ETNK2Q9NVF9 386 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 ELOVL2Q9NXB9 296 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PLK2Q9NYY3 685 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HECAQ9UBI9 543 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 AMACRQ9UHK6 382 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HS3ST2Q9Y278 367 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 HEY1Q9Y5J3 304 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 COL4A3Q01955 1670 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 A0A0D9SEW6 157 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TLDC2A0PJX2 215 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 BCLAF3A2AJT9 711 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CFAP69A5D8W1 941 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TBC1D3BA6NDS4 549 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 DFFAO00273 331 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 MCF2LO15068 1137 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 DCXO43602 365 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 MFSD11O43934 449 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ZMPSTE24O75844 475 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TOX4O94842 621 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PECAM1P16284 738 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CCNCP24863 283 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CXCR5P32302 372 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 HSPA9P38646 679 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 NNMTP40261 264 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CSKP41240 450 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PAFAH1B1P43034 410 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PAPOLAP51003 745 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 RENBPP51606 427 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 GYS2P54840 703 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 DYNLT1P63172 113 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 HHEXQ03014 270 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CKAP4Q07065 602 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 IL10RBQ08334 325 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 PPIDQ08752 370 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SIGLEC14Q08ET2 396 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 FOXE3Q13461 319 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ENPP2Q13822 863 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 HNRNPDQ14103 355 aaKnown RBP5.81□□□□□ -1.48
SCAF11-213ENST00000550629 NOMO1Q15155 1222 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TERF2Q15554 542 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 CYP1B1Q16678 543 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 WHAMMP3Q1A5X7 153 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 FUT11Q495W5 492 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 SLC45A4Q5BKX6 768 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 DGKKQ5KSL6 1271 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 KAZNQ674X7 775 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 IL31Q6EBC2 164 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 TPRG1Q6ZUI0 275 aa5.81□□□□□ -1.48
SCAF11-213ENST00000550629 ESPNLQ6ZVH7 1005 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms