RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MRPL40Q9NQ50 206 aaKnown RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PTBP2Q9UKA9 531 aaKnown RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 DNAJC15Q9Y5T4 150 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 LINC01553A4QN01 128 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 HIDE1A8MVS5 230 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 E2F3O00716 465 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 XYLBO75191 536 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ESRRBO95718 433 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CKMP06732 381 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PIM1P11309 404 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SAT1P21673 171 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 EPHA3P29320 983 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 FMO4P31512 558 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CDKN1CP49918 316 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 KDSRQ06136 332 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF423Q2M1K9 1284 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ATXN7L2Q5T6C5 722 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 BRAT1Q6PJG6 821 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CRTC1Q6UUV9 634 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SBSNQ6UWP8 590 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ADAMTSL2Q86TH1 951 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 GOLM1Q8NBJ4 401 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 OSBPL1AQ9BXW6 950 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ASIC5Q9NY37 505 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 TRMT6Q9UJA5 497 aaKnown RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 E9PBE3 544 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 HGSO14964 777 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 AZIN1O14977 448 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 SLC16A5O15375 505 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 PEX1O43933 1283 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 KLHL41O60662 606 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CIB2O75838 187 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 RHOP08100 348 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 PIRTP0C851 137 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 PRSS56P0CW18 603 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 C7P10643 843 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 PABPC1P11940 636 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 MSH3P20585 1137 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 HNRNPFP52597 415 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CLCQ05315 142 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 FOXM1Q08050 763 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CCNIQ14094 377 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ANKS6Q68DC2 871 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CAMK1DQ8IU85 385 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ADGRG2Q8IZP9 1017 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 NXPE1Q8N323 547 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ROPN1LQ96C74 230 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 C19orf60Q96EN9 201 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 GPATCH1Q9BRR8 931 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CCDC68Q9H2F9 335 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 EFCAB1Q9HAE3 211 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 GALPQ9UBC7 116 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 MTF2Q9Y483 593 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 UBXN8O00124 270 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 TRIM24O15164 1050 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ENO2P09104 434 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 MPC1LP0DKB6 136 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 UROSP10746 265 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ITGALP20701 1170 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CREB5Q02930 508 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 TRAP1Q12931 704 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 STX5Q13190 355 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 FXNQ16595 210 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 OTOP2Q7RTS6 562 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 FBXO39Q8N4B4 442 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CCNYL1Q8N7R7 359 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 POF1BQ8WVV4 589 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 LMAN2LQ9H0V9 348 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 TUBB1Q9H4B7 451 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 S100A14Q9HCY8 104 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 ZDHHC3Q9NYG2 299 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 CD300AQ9UGN4 299 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 EVLQ9UI08 416 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 SLC25A13Q9UJS0 675 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
RAB5B-206ENST00000549505 SLC30A1Q9Y6M5 507 aa9.88□□□□□ -0.83
RAB5B-206ENST00000549505 AP2A2O94973 939 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ACPPP15309 386 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 VHLP40337 213 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ECT2LQ008S8 904 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PTSQ03393 145 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 C6orf163Q5TEZ5 329 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 PRR23BQ6ZRT6 265 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 USP45Q70EL2 814 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 NLRP8Q86W28 1048 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SERPINA9Q86WD7 417 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 DSELQ8IZU8 1212 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 BADQ92934 168 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 VPS35Q96QK1 796 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 CORO1BQ9BR76 489 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 GPR63Q9BZJ6 419 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 ABCD2Q9UBJ2 740 aa9.87□□□□□ -0.83
RAB5B-206ENST00000549505 SUCOQ9UBS9 1254 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms