RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SIKE1Q9BRV8 207 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 YIPF3Q9GZM5 350 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ZBTB26Q9HCK0 441 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 S100A14Q9HCY8 104 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 TBC1D30Q9Y2I9 924 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 CROCCQ5TZA2 2017 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 WFS1O76024 890 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 CR2P20023 1033 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PBLDP30039 288 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 HLA-FP30511 346 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 IRS1P35568 1242 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 SLC7A2P52569 658 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 NCEH1Q6PIU2 408 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 RNF111Q6ZNA4 994 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 AMIGO2Q86SJ2 522 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 DDX53Q86TM3 631 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ZSWIM9Q86XI8 627 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 BEND7Q8N7W2 519 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 METTL6Q8TCB7 284 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 BADQ92934 168 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 RTKNQ9BST9 563 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ZFP14Q9HCL3 533 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PRKAG2Q9UGJ0 569 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 SORCS3Q9UPU3 1222 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 MED16Q9Y2X0 877 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 UPK3BL1B0FP48 263 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 UPK3BL2E5RIL1 263 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 TLL1O43897 1013 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PEX1O43933 1283 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 EPOP01588 193 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ALDOCP09972 364 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 TTPAP49638 278 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 FOXD4Q12950 439 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 DBN1Q16643 649 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 TMC5Q6UXY8 1006 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 GRASPQ7Z6J2 395 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 MILR1Q7Z6M3 343 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 LMNTD1Q8N9Z9 388 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ACTRT2Q8TDY3 377 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 FUBP1Q96AE4 644 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 SPDL1Q96EA4 605 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 RANBP9Q96S59 729 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 MMADHCQ9H3L0 296 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 STN1Q9H668 368 aaKnown RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 FNIP2Q9P278 1114 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 A0A0J9YYE9 177 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ANTXRLA6NF34 631 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 NPIPB15A6NHN6 443 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 NPHS1O60500 1241 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 GLUD1P00367 558 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 EPCAMP16422 314 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 AQP4P55087 323 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 FRG1Q14331 258 aaKnown RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 CLYBLQ8N0X4 340 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 FNDC5Q8NAU1 212 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 RP9Q8TA86 221 aaKnown RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF599Q96NL3 588 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 SERPINI1Q99574 410 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 EBF3Q9H4W6 596 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 CXorf56Q9H5V9 222 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 OR2AG2A6NM03 316 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 PFDN6O15212 129 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ALOX15P16050 662 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 HTR6P50406 440 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 TCEA2Q15560 299 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 SETMARQ53H47 684 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 LY6G5CQ5SRR4 150 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ENDOVQ8N8Q3 282 aaKnown RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 LRGUKQ96M69 825 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF184Q99676 751 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-209ENST00000547018 IL26Q9NPH9 171 aa12.6□□□□□ -0.39
SCAF11-209ENST00000547018 MYOCOSA0A1B0GUC4 107 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SLCO1B7G3V0H7 640 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 PLK4O00444 970 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 ANGPT2O15123 496 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 HK3P52790 923 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 TIGD2Q4W5G0 525 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 SFT2D3Q587I9 215 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 LRRC66Q68CR7 880 aa12.59□□□□□ -0.39
SCAF11-209ENST00000547018 TCEAL8Q8IYN2 117 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms