RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TMEM71Q6P5X7 295 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 VASH2Q86V25 355 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 CCDC50Q8IVM0 306 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 CCDC170Q8IYT3 715 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF567Q8N184 647 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 P3H4Q92791 437 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 WBP1Q96G27 269 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 MRGPRX2Q96LB1 330 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 B3GNT4Q9C0J1 378 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 TRIM39Q9HCM9 518 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 BPIFA1Q9NP55 256 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 PRDM8Q9NQV8 689 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 RAD18Q9NS91 495 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 AKAP7Q9P0M2 348 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-210ENST00000545493 SPENQ96T58 3664 aaKnown RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 RCCD1A6NED2 376 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 PRR19A6NJB7 356 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 SOWAHDA6NJG2 315 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 GPR89AB7ZAQ6 455 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 GPR89BP0CG08 455 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 FECHP22830 423 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 CD82P27701 267 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 CLCNKAP51800 687 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 UBE2IP63279 158 aaKnown RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 SIRPB2Q5JXA9 342 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 TTC30BQ8N4P2 665 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 HTR3CQ8WXA8 447 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 RBM41Q96IZ5 413 aaKnown RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 PLEKHG4BQ96PX9 1271 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 VPS35Q96QK1 796 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 DPYSL5Q9BPU6 564 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 STN1Q9H668 368 aaKnown RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 SCHIP1Q9P0W5 487 aaPredicted RBP20.85■□□□□ 0.93
SCARB1-210ENST00000545493 PDP2Q9P2J9 529 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 SLC23A2Q9UGH3 650 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 PCDHGA3Q9Y5H0 932 aa20.85■□□□□ 0.93
SCARB1-210ENST00000545493 GPR39O43194 453 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 ZRANB2O95218 330 aaKnown RBP eCLIP20.84■□□□□ 0.931e-5■■■■□ 25.7
SCARB1-210ENST00000545493 WT1P19544 449 aaPredicted RBP20.84■□□□□ 0.93
SCARB1-210ENST00000545493 CTNNA1P35221 906 aaKnown RBP20.84■□□□□ 0.93
SCARB1-210ENST00000545493 CYLC1P35663 651 aaPredicted RBP20.84■□□□□ 0.93
SCARB1-210ENST00000545493 LY6DQ14210 128 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 ATP13A5Q4VNC0 1218 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 BBS12Q6ZW61 710 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 SLC9B2Q86UD5 537 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF547Q8IVP9 402 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 AGBL5Q8NDL9 886 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 OR10G6Q8NH81 332 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 AHCYL2Q96HN2 611 aaKnown RBP20.84■□□□□ 0.93
SCARB1-210ENST00000545493 FCRL5Q96RD9 977 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 GORASP1Q9BQQ3 440 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 TBC1D10AQ9BXI6 508 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 OSGEPL1Q9H4B0 414 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 OCIAD1Q9NX40 245 aa20.84■□□□□ 0.93
SCARB1-210ENST00000545493 REXO2Q9Y3B8 237 aaKnown RBP20.84■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF462Q96JM2 2506 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 KIR2DS5A0A0G2JLQ3 304 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 A0A0G2JNG1 304 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 APOC4-APOC2K7ER74 178 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 KIR2DS3K7RE56 304 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 MTSS1O43312 755 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 APOC2P02655 101 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 SLC2A4P14672 509 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 HMGCLP35914 325 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF75DP51815 510 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 EPHA4P54764 986 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 KIR2DS5Q14953 304 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 SPA17Q15506 151 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 INSCQ1MX18 579 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 MANEAQ5SRI9 462 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 DAAM2Q86T65 1068 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 LRRTM4Q86VH4 590 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 RCOR2Q8IZ40 523 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 SLC25A41Q8N5S1 370 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 BMPERQ8N8U9 685 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 IPMKQ8NFU5 416 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 TAAR9Q96RI9 348 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 SRPK1Q96SB4 655 aaKnown RBP20.83■□□□□ 0.93
SCARB1-210ENST00000545493 TIMM29Q9BSF4 260 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 HEMGNQ9BXL5 484 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 C10orf88Q9H8K7 445 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 CPNE7Q9UBL6 633 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 PCDHGA4Q9Y5G9 962 aa20.83■□□□□ 0.93
SCARB1-210ENST00000545493 HELZ2Q9BYK8 2649 aaKnown RBP20.83■□□□□ 0.92
SCARB1-210ENST00000545493 LILRA5A6NI73 299 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 HACD1B0YJ81 288 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 STMND1H3BQB6 276 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 NDUFA10O95299 355 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 CSTF2P33240 577 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCARB1-210ENST00000545493 CA5AP35218 305 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 PPM1FP49593 454 aaPredicted RBP20.82■□□□□ 0.92
SCARB1-210ENST00000545493 SLC1A5Q15758 541 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 SEPT7Q16181 437 aaKnown RBP20.82■□□□□ 0.92
SCARB1-210ENST00000545493 TMEM164Q5U3C3 297 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 CCDC70Q6NSX1 233 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 WDR74Q6RFH5 385 aaPredicted RBP20.82■□□□□ 0.92
SCARB1-210ENST00000545493 C11orf96Q7Z7L8 435 aa20.82■□□□□ 0.92
SCARB1-210ENST00000545493 FAM129CQ86XR2 697 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms