RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	KIR2DS5	Q14953	304 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	ATP13A5	Q4VNC0	1218 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	DARS2	Q6PI48	645 aa	Known RBP	13.24	□□□□□ -0.29
POLE-222	ENST00000545015	C19orf48	Q6RUI8	117 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	RAB11FIP2	Q7L804	512 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	CHST15	Q7LFX5	561 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-222	ENST00000545015	TMPRSS9	Q7Z410	1059 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	PDZD3	Q86UT5	571 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	PIM3	Q86V86	326 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	FBXO39	Q8N4B4	442 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	SLC35B2	Q8TB61	432 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	BRSK1	Q8TDC3	778 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	CCDC97	Q96F63	343 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-222	ENST00000545015	DCBLD2	Q96PD2	775 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	TIMM29	Q9BSF4	260 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	OR2AG1	Q9H205	316 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	SYNDIG1	Q9H7V2	258 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	C10orf88	Q9H8K7	445 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	EPB41L5	Q9HCM4	733 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	PDP2	Q9P2J9	529 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	TBC1D29	Q9UFV1	150 aa		13.24	□□□□□ -0.29
POLE-222	ENST00000545015	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-222	ENST00000545015	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-222	ENST00000545015	IGHV1OR21-1	A0A087WYE8	117 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PMS2P1	A4D2B8	440 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	GAPDHS	O14556	408 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-222	ENST00000545015	HGS	O14964	777 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-222	ENST00000545015	KMO	O15229	486 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	KCNJ13	O60928	360 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	TNFSF15	O95150	251 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	FTCD	O95954	541 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	AGT	P01019	485 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	ACP5	P13686	325 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	F3	P13726	295 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	ITPKB	P27987	946 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PSMB4	P28070	264 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	UGT1A5	P35504	534 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	TLE3	Q04726	772 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PRPSAP1	Q14558	356 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	TAF1A	Q15573	450 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-222	ENST00000545015	KCTD11	Q693B1	232 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	WASH2P	Q6VEQ5	465 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-222	ENST00000545015	GLT6D1	Q7Z4J2	308 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	C11orf96	Q7Z7L8	435 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	LRRTM4	Q86VH4	590 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	ZNF547	Q8IVP9	402 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	SPACA3	Q8IXA5	215 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	SLC25A41	Q8N5S1	370 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	CCDC112	Q8NEF3	446 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	DDHD1	Q8NEL9	900 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	OR4D9	Q8NGE8	314 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	BLOC1S5	Q8TDH9	187 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	SH3KBP1	Q96B97	665 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	RTP4	Q96DX8	246 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	FOXP3	Q9BZS1	431 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PRORY	Q9H606	182 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	UCK1	Q9HA47	277 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	BPIFA1	Q9NP55	256 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	WASH6P	Q9NQA3	447 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PKP3	Q9Y446	797 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	PRKAB1	Q9Y478	270 aa		13.23	□□□□□ -0.29
POLE-222	ENST00000545015	SCN8A	Q9UQD0	1980 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	NVL	O15381	856 aa	Known RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	KRT86	O43790	486 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	CDK14	O94921	469 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	SLC4A1	P02730	911 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	ZNF7	P17097	686 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	XRCC1	P18887	633 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	ALDH4A1	P30038	563 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	LIMK2	P53671	638 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	EPHA4	P54764	986 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	UCN	P55089	124 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	UBE2I	P63279	158 aa	Known RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	PDE1B	Q01064	536 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	TMEM115	Q12893	351 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	ITGA9	Q13797	1035 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	PARP6	Q2NL67	630 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	MAP9	Q49MG5	647 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	KHDC1	Q4VXA5	237 aa	Known RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	LDLRAP1	Q5SW96	308 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	DENND5A	Q6IQ26	1287 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	ABRAXAS1	Q6UWZ7	409 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	SLC9B2	Q86UD5	537 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	CCDC110	Q8TBZ0	833 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	SNRNP27	Q8WVK2	155 aa	Known RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	CMKLR1	Q99788	373 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	NUDT22	Q9BRQ3	303 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	FICD	Q9BVA6	458 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	SEMA6C	Q9H3T2	930 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	EPB41L1	Q9H4G0	881 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	STN1	Q9H668	368 aa	Known RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	SLC23A2	Q9UGH3	650 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	KCNK6	Q9Y257	313 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	LOXL2	Q9Y4K0	774 aa		13.22	□□□□□ -0.29
POLE-222	ENST00000545015	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-222	ENST00000545015	UNC13C	Q8NB66	2214 aa		13.21	□□□□□ -0.29
POLE-222	ENST00000545015	PTPRQ	Q9UMZ3	2332 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms